Kisho is an information platform, not a medical provider. Nothing on this site constitutes medical advice, diagnosis, or treatment recommendations. All content is aggregated from publicly available sources (including ClinicalTrials.gov, PubMed, FDA.gov, and Orphanet) and is provided for informational purposes only. Clinical trial eligibility, treatment decisions, and any health-related actions should always be discussed with a qualified healthcare professional. Kisho does not endorse any specific therapy, organization, or clinical trial. Terms of use · Privacy policy
Features include always present findings: Decreased total neutrophil count; and common findings: Recurrent urinary tract infections, Neonatal sepsis, Prominent superficial veins, and Intermittent thrombocytopenia and others. 51 total HPO annotations.
Organ System | Phenotype Count | Example Features |
|---|---|---|
Blood and immune system | 11 | Recurrent lower respiratory tract infections, Recurrent urinary tract infections, Recurrent upper respiratory tract infections |
Lungs and breathing | 5 | Recurrent lower respiratory tract infections, Recurrent upper respiratory tract infections, High blood pressure in lung arteries (pulmonary arterial hypertension) |
Ears | 3 | Hearing loss (hearing impairment), Inner ear hearing loss (sensorineural hearing impairment), Otitis media |
Head and neck | 3 | Cleft palate, Microcephaly, High palate |
Heart and blood vessels | 3 | Mitral regurgitation, Secundum atrial septal defect, High blood pressure in lung arteries (pulmonary arterial hypertension) |
Digestive system | 3 | Enlarged liver (hepatomegaly), Enlarged spleen (splenomegaly), Hepatosplenomegaly |
Pregnancy and birth | 2 | Neonatal omphalitis, Neonatal sepsis |
Growth and development | 2 | Failure to thrive, Growth delay |
Muscles | 1 | Myopathy |
Kidneys and urinary system | 1 | Recurrent urinary tract infections |
Brain and nerves | 1 | Global developmental delay |
G6PC3 deficiency is highly variable in its severity and associated clinical features. Individuals with "nonsyndromic" disease have only severe congenital neutropenia. The majority of persons with G6PC3 deficiency have cardiovascular and/or urogenital features (so-called classic G6PC3 deficiency). Of those with classic disease, a subset are more severely affected (so-called Dursun syndrome) because of the additional involvement of myeloid cells, primary pulmonary hypertension developing in the newborn period, and minor dysmorphic features. While it is estimated that nearly 10% of G6CP3 deficiency is the nonsyndromic form, this could be an underestimate due to ascertainment bias (i.e., selection of more severe phenotypes for testing of G6PC3 in previous studies) .
Source: GeneReviews — "G6PC3 Deficiency"
G6PC3 encodes glucose-6-phosphatase catalytic subunit 3 (346 aa). Hydrolyzes glucose-6-phosphate to glucose in the endoplasmic reticulum. Highest expression in Pituitary (110.3 TPM) and Cells Cultured fibroblasts (105.5 TPM).
Autosomal recessive severe congenital neutropenia due to G6PC3 deficiency is caused by mutations in the G6PC3 gene on chromosome 17.
The G6PC3 protein participates in Defective G6PC3 does not hydrolyze glucose 6-phosphate, Tyrosinase oxidises tyrosine to dopaquinone, and Severe congenital neutropenia type 4 (G6PC3) pathways.
G6PC3 is classified as a druggable target (Enzyme and Transporter categories) with score 0.0.
No obvious genotype-phenotype correlations explain the difference between the marked cellularity of myeloid cells in the bone marrow of individuals with G6PC3 deficiency . Based on limited data, certain pathogenic variants (e.g., p.Phe44Ser) appear to be more often (or only) associated with nonsyndromic neutropenia .
Source: GeneReviews — "G6PC3 Deficiency"
Consensus diagnostic criteria for G6PC3 deficiency have not been established.
G6PC3 deficiency should be suspected in individuals with the following:
Severe congenital neutropenia defined as an absolute neutrophil count 0.5 x 109/L which usually results in early-onset, frequent, severe bacterial infections
Note: Although maturation arrest of myeloid cells was initially thought to be the typical finding on bone marrow examination , subsequent reports identified bone marrows that were hypercellular and normocellular . More recently, sequential bone marrow examinations have typically revealed normal maturation and only rarely arrested maturation .
A family history consistent with autosomal recessive inheritance
Source: GeneReviews — "G6PC3 Deficiency"
Severe congenital neutropenia is genetically heterogeneous . The differential diagnosis of G6PC3 deficiency can be divided into inherited conditions in which neutropenia predominates and those in which neutropenia may be a part of a multisystem disorder.
Severe congenital neutropenia type 1 (SCN1), an autosomal dominant disorder caused by mutation of ELANE, is the most common genetic cause of congenital neutropenia. ELANE-related congenital neutropenia is characterized by recurrent fever, skin and oropharyngeal inflammation (i.e., mouth ulcers, gingivitis, sinusitis, and pharyngitis), and cervical adenopathy . Mutation of ELANE also causes cyclic neutropenia, a less severe disorder.
Source: GeneReviews — "G6PC3 Deficiency"
Genetic testing for G6PC3 is available. Testing is considered confirmatory for diagnosis.
No approved treatments are currently available for autosomal recessive severe congenital neutropenia due to G6PC3 deficiency. The disease remains an area of unmet medical need.
To establish the extent of disease and needs in an individual diagnosed with G6PC3 deficiency, the following evaluations are recommended:
Full blood count to look for evidence of other hematologic involvement (i.e., intermittent thrombocytopenia and/or lymphopenia)
Immunologic evaluation for T-cell subsets in individuals with a more severe presentation and unusual non-bacterial infections
Consultation with a cardiologist to evaluate for congenital heart disease
Renal and pelvic ultrasound examination to look for urogenital malformations
Growth parameters in children and pubertal development in adolescents
Age appropriate endocrine assessment for evidence of the hormone deficiencies reported (i.e., growth hormone, gonadotropins, thyroid hormone)
Biochemical investigations to look for abnormalities in the lipid profile
Consultation with a clinical geneticist and/or genetic counselor
Neutropenia. Treatment with granulocyte colony stimulating factor (G-CSF) improves neutrophil numbers, reduces the number of infections, and improves the quality of life . Of note, the dose required to keep absolute neutrophil counts above 0.5x109/L can vary greatly among affected individuals. In some individuals G-CSF – even in large doses – may fail to control infections . A few mildly affected individuals have been reported to be adequately managed with prophylactic antibiotics alone .
Source: GeneReviews — "G6PC3 Deficiency"
Search ClinicalTrials.gov in the US and EU Clinical Trials Register in Europe for access to information on clinical studies for a wide range of diseases and conditions. Note: There may not be clinical trials for this disorder.
Source: GeneReviews — "G6PC3 Deficiency"
View trials for autosomal recessive severe congenital neutropenia due to G6PC3 deficiency
The following are appropriate:
Frequent follow up by a hematologist or immunologist to monitor infection frequency and neutrophil counts to ensure an adequate response to G-CSF (i.e., absolute neutrophil counts above 0.5x109/L)
Monitoring of growth in children and pubertal development in adolescents
Biochemical profile including lipid profile
Monitoring for development of varicose veins, especially in adults
Monitoring for osteopenia/osteoporosis
Source: GeneReviews — "G6PC3 Deficiency"
Phenotype severity distribution: 1 always present feature, 6 common features.
Estimated prevalence: <1 in 1,000,000 (VERY_RARE).
No clinical trials have been registered for autosomal recessive severe congenital neutropenia due to G6PC3 deficiency.
4 publications have been identified in PubMed for autosomal recessive severe congenital neutropenia due to G6PC3 deficiency. Research spans Review / Meta-Analysis (50%) and Basic Science / Preclinical (50%).
Lava SAG (2024). [PMID: 38635113](https://pubmed.ncbi.nlm.nih.gov/38635113/). *Paediatric drugs*. [Review / Meta-Analysis]
Zhen X (2024). [PMID: 38798393](https://pubmed.ncbi.nlm.nih.gov/38798393/). *medRxiv : the preprint server for health sciences*. [Basic Science / Preclinical]
Katsaras G (2024). [PMID: 38921186](https://pubmed.ncbi.nlm.nih.gov/38921186/). *Hematology reports*. [Review / Meta-Analysis]
Zhen X (2024). [PMID: 39630167](https://pubmed.ncbi.nlm.nih.gov/39630167/). *Journal of clinical immunology*. [Basic Science / Preclinical]
Data assembled from 8 of 12 sources · Last updated Sep 21, 2026, 8:35 AM UTC
Online Mendelian Inheritance in Man
European rare disease database
Genetic and Rare Diseases Info Center
Common questions about autosomal recessive severe congenital neutropenia due to G6PC3 deficiency