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Dihydropyrimidinase (DPD) deficiency is a very rare pyrimidine metabolism disorder with a variable clinical presentation including gastrointestinal manifestations (feeding problems, cyclic vomiting, gastroesophageal reflux, malabsorption with villous atrophy), hypotonia, intellectual deficit, seizures, and less frequently growth retardation, failure to thrive, microcephaly and autism. Asymptomatic cases are also reported. DPD deficiency increases the risk of 5-FU toxicity.
Features include always present findings: Reduced dihydropyrimidine dehydrogenase level, Elevated creatine kinase (muscle enzyme) (elevated circulating creatine kinase concentration), Elevated CSF dihydrouracil concentration, and Elevated urinary dihydrouracil level and others; and common findings: Seizure, Intellectual disability, Feeding difficulties, and Elevated circulating uracil concentration. 35 total HPO annotations.
Organ System | Phenotype Count | Example Features |
|---|---|---|
Lab test results | 7 |
DPYS encodes dihydropyrimidinase (519 aa). Catalyzes the second step of the reductive pyrimidine degradation, the reversible hydrolytic ring opening of dihydropyrimidines. Highest expression in Liver (132.8 TPM) and Kidney Cortex (39.1 TPM).
Dihydropyrimidinuria is associated with mutations in the DPYS gene on chromosome 8.
DPYS is classified as a druggable target (Enzyme category) with score 0.8.
Genetic testing for DPYS is available. Testing is considered confirmatory for diagnosis.
Phenotype severity distribution: 13 always present features, 4 common features.
Estimated prevalence: <1 in 1,000,000 (VERY_RARE).
1 clinical trial registered, 1 recruiting. Interventions under study include other interventions. Research is primarily sponsored by academic and government institutions.
5 publications have been identified in PubMed for dihydropyrimidinuria. Research spans Case Report / Case Series (80%) and Epidemiology / Natural History (20%).
Hao N (2026). [PMID: 41691317](https://pubmed.ncbi.nlm.nih.gov/41691317/). *Hum Genomics*. [Epidemiology / Natural History]
Mohideen SB (2025). [PMID: 39126710](https://pubmed.ncbi.nlm.nih.gov/39126710/). *Laboratory medicine*. [Case Report / Case Series]
Malekkou A (2024). [PMID: 38528593](https://pubmed.ncbi.nlm.nih.gov/38528593/). *BMC medical genomics*. [Case Report / Case Series]
Erdal İ (2024). [PMID: 38958169](https://pubmed.ncbi.nlm.nih.gov/38958169/). *Journal of pediatric endocrinology & metabolism : JPEM*. [Case Report / Case Series]
Li J (2024). [PMID: 39558747](https://pubmed.ncbi.nlm.nih.gov/39558747/). *Pediatrics*. [Case Report / Case Series]
Data assembled from 7 of 12 sources · Last updated Sep 19, 2026, 11:53 AM UTC
Online Mendelian Inheritance in Man
European rare disease database
Genetic and Rare Diseases Info Center
Elevated creatine kinase (muscle enzyme) (elevated circulating creatine kinase concentration), Elevated circulating thymine concentration, Elevated circulating aldolase concentration
Brain and nerves | 6 | Seizure, Intellectual disability, Extrapyramidal dyskinesia |
Kidneys and urinary system | 3 | Elevated urinary thymine level, Elevated urinary dihydrouracil level, Elevated urinary dihydrothymine level |
Growth and development | 2 | Failure to thrive, Growth delay |
Digestive system | 2 | Reduced hepatic dihydropyrimidinase activity, Feeding difficulties |
Arms and legs | 1 | Short phalanx of finger |
Metabolism | 1 | Metabolic acidosis |
Head and neck | 1 | Microcephaly |
Muscles | 1 | Exercise-induced muscle cramps |