Kisho is an information platform, not a medical provider. Nothing on this site constitutes medical advice, diagnosis, or treatment recommendations. All content is aggregated from publicly available sources (including ClinicalTrials.gov, PubMed, FDA.gov, and Orphanet) and is provided for informational purposes only. Clinical trial eligibility, treatment decisions, and any health-related actions should always be discussed with a qualified healthcare professional. Kisho does not endorse any specific therapy, organization, or clinical trial. Terms of use · Privacy policy
Gamma-aminobutyric acid transaminase (GABA-T) deficiency is an extremely rare disorder of GABA metabolism characterized by a severe neonatal-infantile epileptic encephalopathy (manifesting with symptoms such as seizures, hypotonia, hyperreflexia and developmental delay) and growth acceleration.
Features include always present findings: Lethargy, High-pitched cry, Seizure, and Feeding difficulties and others; and common findings: Tall stature, Downslanted palpebral fissures, Cerebellar hypoplasia, and Agenesis of corpus callosum and others.
Organ System | Phenotype Count | Example Features |
|---|---|---|
Brain and nerves | 3 | Seizure, Global developmental delay, Overactive reflexes (hyperreflexia) |
ABAT encodes 4-aminobutyrate aminotransferase (500 aa). Catalyzes the conversion of gamma-aminobutyrate and L-beta-aminoisobutyrate to succinate semialdehyde and methylmalonate semialdehyde, respectively. Highest expression in Brain Frontal Cortex BA9 (98.8 TPM) and Brain Nucleus accumbens basal ganglia (98.5 TPM).
GABA aminotransaminase deficiency is associated with mutations in the ABAT gene on chromosome 16.
ABAT is classified as a druggable target (Druggable Genome and Enzyme categories) with score 0.9.
54 pathogenic variants reported in ABAT in ClinVar.
Genetic testing for ABAT is available. Testing is considered confirmatory for diagnosis.
Phenotype severity distribution: 7 always present features, 8 common features.
Estimated prevalence: <1 in 1,000,000 (VERY_RARE).
No clinical trials have been registered for GABA aminotransaminase deficiency.
4 publications have been identified in PubMed for GABA aminotransaminase deficiency. Research spans Basic Science / Preclinical (75%) and Case Report / Case Series (25%).
Alammary D (2026). [PMID: 41573381](https://pubmed.ncbi.nlm.nih.gov/41573381/). *JIMD reports*. [Case Report / Case Series]
Holmes-Léon G (2026). [PMID: 41819842](https://pubmed.ncbi.nlm.nih.gov/41819842/). *J Neurosci*. [Basic Science / Preclinical]
Ambrosini G (2025). [PMID: 40414180](https://pubmed.ncbi.nlm.nih.gov/40414180/). *Molecular genetics and metabolism*. [Basic Science / Preclinical]
Zou Z (2024). [PMID: 39133003](https://pubmed.ncbi.nlm.nih.gov/39133003/). *Applied and environmental microbiology*. [Basic Science / Preclinical]
Data assembled from 7 of 12 sources · Last updated Sep 19, 2026, 11:55 PM UTC
Online Mendelian Inheritance in Man
European rare disease database
Genetic and Rare Diseases Info Center
Common questions about GABA aminotransaminase deficiency
Growth and development |
1 |
Tall stature |
Digestive system | 1 | Feeding difficulties |
Muscles | 1 | Low muscle tone (hypotonia) |