Kisho is an information platform, not a medical provider. Nothing on this site constitutes medical advice, diagnosis, or treatment recommendations. All content is aggregated from publicly available sources (including ClinicalTrials.gov, PubMed, FDA.gov, and Orphanet) and is provided for informational purposes only. Clinical trial eligibility, treatment decisions, and any health-related actions should always be discussed with a qualified healthcare professional. Kisho does not endorse any specific therapy, organization, or clinical trial. Terms of use · Privacy policy
A disorder of glycogen metabolism caused by a deficiency in liver and muscle phosphorylase kinase subunit b, is autosomal recessive and can lead to hepatomegaly, hypoglycemia after prolonged fasting, and growth retardation.
Features include common findings: Enlarged liver (hepatomegaly), Hypoglycemia, and Growth delay; and sometimes findings: Short stature, Low muscle tone (hypotonia), Muscle weakness, and Enlarged spleen (splenomegaly) and others. 12 total HPO annotations.
Organ System | Phenotype Count | Example Features |
|---|---|---|
Digestive system | 5 | Diarrhea, Reduced hepatic phosphorylase kinase activity, Enlarged liver (hepatomegaly) |
Muscles | 3 | Low muscle tone (hypotonia), Increased muscle glycogen content, Muscle weakness |
Growth and development | 2 | Short stature, Growth delay |
Blood and immune system | 1 | Enlarged spleen (splenomegaly) |
Glycogen storage disease type IX (GSD IX) is caused by PhK deficiency affecting primarily liver or muscle.
While liver PhK deficiency has been considered a mild condition, more severe involvement has been documented . The three subtypes, caused by pathogenic variants in three different genes (PHKA2, PHKB, and PHKG2), cannot be distinguished by their clinical features, which can vary significantly in severity. See also . Presentation. Typically, an affected child presents in the first years of life with hepatomegaly and growth restriction. Hyperketotic hypoglycemia, if present, is usually mild but can be severe and recurrent.
Hepatomegaly
Source: GeneReviews — "Phosphorylase Kinase Deficiency"
PHKB function has not been fully characterized.
Glycogen storage disease IXb is caused by mutations in the PHKB gene on chromosome 16.
Pathogenic variants in PHKA1 result in muscle glycogenosis; pathogenic variants in PHKA2 and PHKG2 cause liver glycogenosis; pathogenic variants in PHKB and, rarely, PHKG2 cause liver and muscle glycogenosis (muscle signs are variably present). There is no consistent genotype-phenotype correlation for pathogenic variants in any of the four genes. Pathogenic variants in PHKG2 appear to result in more severe disease with an increased risk of liver fibrosis and cirrhosis, although persons with a milder course have been observed. Progressive liver disease has also been noted in individuals with pathogenic variants in PHKA2.
Source: GeneReviews — "Phosphorylase Kinase Deficiency"
Phosphorylase kinase deficiency causing glycogen storage disease type IX (GSD IX) results from deficiency of the enzyme phosphorylase b kinase (PhK), an enzyme with a key regulatory role in the breakdown of glycogen. Deficiency of this enzyme, which is composed of four copies each of four subunits (, , , and ), results in considerable clinical variability . For the purposes of this review, phosphorylase kinase (PhK) deficiency has been divided into liver PhK deficiency and muscle PhK deficiency (see and ). Liver PhK deficiency is further divided into three subtypes based on the gene in which pathogenic variants occur (PHKA2, PHKB, and PHKG2) and inheritance pattern. It should be noted that pathogenic variants in PHKB and, rarely, PHKG2 result in PhK deficiency both in liver and muscle.
Source: GeneReviews — "Phosphorylase Kinase Deficiency"
Table 3. Genetic Disorders to Consider in the Differential Diagnosis of Phosphorylase Kinase (PhK) Deficiency
PhK DeficiencyType | Disorder | MOI | Overlapping Features | Distinguishing Features | Gene(s) | Enzyme |
|---|---|---|---|---|---|---|
Glycogen storage disease type VI | AR | Clinical features can be indistinguishable. |
Genetic testing for PHKB is available. Testing is considered confirmatory for diagnosis.
Biomarker and diagnostic research for glycogen storage disease IXb has been reported in the published literature.
No approved treatments are currently available for glycogen storage disease IXb. The disease remains an area of unmet medical need.
To establish the extent of disease and needs of an individual diagnosed with liver PhK deficiency, the following evaluations are recommended if they have not already been completed:
Measurement of blood glucose concentration (normal 70 mg/dL) for two to three days:
Upon waking in the morning;
Prior to meals and nighttime supplementation with oral cornstarch; and
After activity
Measurement of blood ketone levels for two to three days:
Upon waking in the morning;
Prior to meals and nighttime supplementation with oral cornstarch; and
After activity.
Elevated blood ketones (beta-hydroxybutyrate 1.0 mmol/L) could be an indicator of suboptimal metabolic control and pending hypoglycemia.
Liver imaging, if not performed in the past year. The type of liver imaging (ultrasound, MRI, or CT) is determined by factors such as age and underlying liver status (e.g., liver cirrhosis).
Basic metabolic panel including liver enzymes (AST, ALT, and alkaline phosphatase)
Prothrombin time
Lipid panel (cholesterol and triglyceride concentrations)
Serum creatine kinase measurement (Some individuals with liver PhK deficiency have muscle involvement.)
Baseline echocardiogram (Baseline echocardiogram may be done as a precaution as interventricular septal hypertrophy was found in an individual with GSD IX caused by pathogenic variants in PHKB .)
Source: GeneReviews — "Phosphorylase Kinase Deficiency"
Liver PhK deficiency. Affected Individuals should avoid the following:
Large amounts of simple sugars, as they will increase liver storage of glycogen and may result in rapid fluctuations in levels of blood glucose and insulin
Prolonged fasting
High-impact contact sports if significant (moderate to massive) hepatomegaly is present. The final decision is based on clinician judgment.
Drugs known to:
Cause hypoglycemia, such as insulin and insulin secretagogues (the sulfonylureas)
Mask symptoms of hypoglycemia, such as beta-blockers
Alcohol, as this may predispose to hypoglycemia
Glucagon, as glycogenolysis is defective
Augmentin®, as it can cause malabsorption and contains clavulanic acid, which is associated with idiopathic liver disease
Growth hormone therapy unless there is proven growth hormone deficiency, as it can promote ketosis and development of liver adenomas
Hypoglycemic events in adults with liver PhK deficiency are relatively uncommon; however, caution should be used with drugs causing potential hypoglycemia, particularly in persons with impaired liver function. Muscle PhK deficiency. Affected individuals should avoid the following:
Search ClinicalTrials.gov in the US and EU Clinical Trials Register in Europe for information on clinical studies for a wide range of diseases and conditions. Note: There may not be clinical trials for this disorder.
Source: GeneReviews — "Phosphorylase Kinase Deficiency"
2 trials found
Liver PhK deficiency
Regular evaluation by a metabolic physician familiar with liver PhK deficiency to monitor medical issues and a metabolic nutritionist to give dietary recommendations and monitor cornstarch requirement
Regular monitoring of blood glucose concentration and ketones, as recommended by a metabolic physician and nutritionist. Blood glucose concentrations and ketones should also be measured during times of stress including illness, intense activity, rapid growth, puberty, and pregnancy; and at any time in which intake of food is reduced, or meal and/or cornstarch dose or scheduling is altered.
Note: It is possible that blood glucose concentrations may be normal when moderate to large ketosis in liver PhK deficiency results from increased fatty acid oxidation and upregulated gluconeogenesis. The role of ketone monitoring in this setting as a marker of metabolic control requires further systematic investigation.
Liver imaging. In children younger than age 18 years, liver ultrasound examination every 12 to 24 months. With increasing age, consideration of CT or MRI using intravenous contrast to evaluate for complications of liver disease such as liver adenomas and cirrhosis
Follow-up echocardiogram. No guidelines established; follow up approximately every two years or earlier if symptoms are present
Muscle PhK deficiency
Source: GeneReviews — "Phosphorylase Kinase Deficiency"
Phenotype severity distribution: 3 common features.
Estimated prevalence: Unknown (Unknown prevalence).
2 clinical trials registered, 1 recruiting. Interventions under study include other interventions. Research is primarily sponsored by academic and government institutions.
7 publications have been identified in PubMed for glycogen storage disease IXb. Research spans Epidemiology / Natural History (29%), Other (14%), and Diagnostic / Biomarker (14%).
Magner M (2026). [PMID: 41732189](https://pubmed.ncbi.nlm.nih.gov/41732189/). *Mol Genet Metab Rep*. [Epidemiology / Natural History]
Overduin RJ (2025). [PMID: 41101290](https://pubmed.ncbi.nlm.nih.gov/41101290/). *Mol Genet Metab*. [Diagnostic / Biomarker]
Samanta A (2025). [PMID: 40881090](https://pubmed.ncbi.nlm.nih.gov/40881090/). *World J Clin Pediatr*. [Other]
Kalkan Uçar S (2025). [PMID: 40211049](https://pubmed.ncbi.nlm.nih.gov/40211049/). *Eur J Clin Nutr*. [Clinical Trial Publication]
Geramizadeh B (2024). [PMID: 39707443](https://pubmed.ncbi.nlm.nih.gov/39707443/). *Orphanet J Rare Dis*. [Review / Meta-Analysis]
Venkata Renuka I (2024). [PMID: 39188489](https://pubmed.ncbi.nlm.nih.gov/39188489/). *Cureus*. [Case Report / Case Series]
Yu J (2024). [PMID: 38576397](https://pubmed.ncbi.nlm.nih.gov/38576397/). *Clin Genet*. [Epidemiology / Natural History]
Data assembled from 9 of 12 sources · Last updated Sep 18, 2026, 3:39 AM UTC
Online Mendelian Inheritance in Man
European rare disease database
Genetic and Rare Diseases Info Center
In liver PhK deficiency: low liver glycogen phosphorylase activity on in vitro assay1 |
PYGL |
— |
— |
Glycogen phosphorylase, liver form Glycogen storage disease type I(GSD I) | AR | Hepatomegaly; Hypoglycemia | In GSD I:; Severe fasting lactic acidosis; Hyperuricemia; Significant hyperlipidemia | — | — | — |
Neutropenia In PhK deficiency: ketosis usually present | G6PC1,SLC37A4 | Glucose-6-phosphatase | — | — | — | — |
Glucose-6-phosphate exchanger SLC37A4 Glycogen storage disease type III(GSD III) | AR | Hepatomegaly; Hyperlipidemia | — | — | — | — |
Hypoglycemia ketosis | In GSD III: hypoglycemia more severe muscle involvement w/ CK concentrations | AGL | — | — | — | — |
Glycogen-debranching enzyme Glycogen storage disease type IV (GSD IV) | AR | Hepatomegaly; Liver cirrhosis; Liver dysfunction | In GSD IV:; Hypoglycemia ketosis not typically seen; No hypoglycemia in initial stages; Accumulation of an abnormal glycogen (amylopectin) in liver other tissues | GBE1 | — | — |
1,4-alpha-glucan-branching enzyme Fructose-1,6-bisphosphatase deficiency (Note: Other disorders of gluconeogenesis can also be considered.2) | AR | uric acid, AST, ALT; Fasting hypoglycemia hyperlacticacidemia | — | — | — | — |
Hepatomegaly | In disorders of gluconeogenesis: hypoglycemia after more prolonged (e.g., overnight) fasting or during intercurrent illness w/ carbohydrate intake | FBP1 | — | — | — | — |
Fructose-1,6-bisphosphatase 1 Alpha-1 antitrypsin deficiency3 | AR | AST, ALT | — | — | — | — |
Hepatomegaly | In alpha-1-antitrypsin deficiency: lack of fasting hypoglycemia hyperlacticacidemia | SERPINA1 | — | — | — | — |
Alpha-1 antitrypsin Deoxyguanosine kinase deficiency (mitochondrial DNA depletion syndrome 3) | AR | Hepatomegaly; Hypoglycemia | In deoxyguanosine kinase deficiency:; Neurologic abnormalities; Lactic acidosis | DGUOK | — | — |
Mitochondrial respiratory chain complexes (I, III, IV, V) Mitochondrial complex V (ATP synthase) deficiency (OMIM 604273) | AR | Hepatomegaly | In mitochondrial complex V deficiency:; Ataxia; Lactic acidosis | ATPAF2 | — | — |
ATP synthase Glycerol kinase deficiency (OMIM 307030) | XL | Hypoglycemia | In glycerol kinase deficiency:; Ketoacidosis; Extremely elevated glycerol | GK | — | — |
Glycerol kinase Niemann-Pick disease type B4 (See Acid Sphingomyelinase Deficiency.) | AR | Growth restriction; Hepatomegaly; Hyperlipidemia | In Niemann-Pick disease type B:; Lack of fasting hypoglycemia; Significant splenomegaly; Storage cells characteristic of disease; Other features incl bone pulmonary involvement | SMPD1 | — | — |
Sphingomyelin phosphodiesterase Gaucher disease4 | AR | Hepatom... | — | — | — | — |
Source: GeneReviews — "Phosphorylase Kinase Deficiency"
Vigorous exercise
Medications that can cause rhabdomyolysis (e.g., succinylcholine)
Statins (to be used with caution, as they can cause rhabdomyolysis)
Source: GeneReviews — "Phosphorylase Kinase Deficiency"