Kisho is an information platform, not a medical provider. Nothing on this site constitutes medical advice, diagnosis, or treatment recommendations. All content is aggregated from publicly available sources (including ClinicalTrials.gov, PubMed, FDA.gov, and Orphanet) and is provided for informational purposes only. Clinical trial eligibility, treatment decisions, and any health-related actions should always be discussed with a qualified healthcare professional. Kisho does not endorse any specific therapy, organization, or clinical trial. Terms of use · Privacy policy
An inherited disorder that affects the metabolism of the amino acids. Representative examples include alkaptonuria, homocystinuria, tyrosinemia, and phenylketonuria.
No HPO annotations are available for this condition.
Data assembled from 3 of 12 sources · Last updated Sep 21, 2026, 4:54 AM UTC
Genetic and Rare Diseases Info Center
More than 400 individuals with adenine phosphoribosyltransferase (APRT) deficiency have been reported in the medical literature [, , , , , , , , ].
Table 2.
Presenting Renal Manifestations in APRT Deficiency
Presenting Renal Manifestation | Approximate Frequency
Kidney stone disease1 | 60%-90%
Chronic kidney disease2,3 | 50%
Acute kidney injury4 | 30%5
End-stage renal disease | 15%
1. In both children and adults
2. In adult life
3. Due to DHA crystal nephropathy
4. Due to urinary tract obstruction
5.
Age at presentation. APRT deficiency may present at any age; there is no typical age of clinical onset. However, in at least 50% of affected individuals, symptoms do not occur until adulthood.
Source: GeneReviews — "Adenine Phosphoribosyltransferase Deficiency"
Adenine phosphoribosyltransferase (APRT) deficiency (also known as 2,8-dihydroxyadeninuria) should be suspected in individuals with the following clinical, radiographic, laboratory, and pathology findings [, , , ].
Clinical manifestations
Kidney stone disease and renal colic
Chronic kidney disease (CKD)
Crystal nephropathy (confirmed by kidney biopsy; see Pathology)
Reddish-brown diaper stain in infants and young children
Allograft dysfunction following kidney transplantation
Radiographic findings
Radiolucent kidney stones, detected by ultrasound or computed tomography (CT). Stones are not seen on a plain abdominal x-ray.
Ultrasound examination frequently demonstrates increased echogenicity of the kidneys.
Laboratory findings
Source: GeneReviews — "Adenine Phosphoribosyltransferase Deficiency"
Differential diagnosis of APRT deficiency includes other known causes of radiolucent kidney stones such as uric acid nephrolithiasis (OMIM 605990) and xanthinuria (OMIM PS278300). The diagnosis of APRT deficiency should be considered in all individuals with chronic kidney disease or kidney failure, particularly in those with renal histopathologic features of crystal nephropathy, even in the absence of a history of nephrolithiasis. Pathologists and physicians must be aware that kidney biopsy findings in persons with APRT deficiency may have a similar appearance to and be confused with those of primary hyperoxaluria type 1, type 2, and type 3 .
Source: GeneReviews — "Adenine Phosphoribosyltransferase Deficiency"
Biomarker and diagnostic research for inborn disorder of amino acid metabolism has been reported in the published literature.
No approved treatments are currently available for inborn disorder of amino acid metabolism. The disease remains an area of unmet medical need.
Gene therapy approaches for inborn disorder of amino acid metabolism have been reported in the published literature.
Evaluations Following Initial Diagnosis To establish the extent of disease and needs of an individual diagnosed with adenine phosphoribosyltransferase (APRT) deficiency, the evaluations (if not performed as part of the evaluation that led to the diagnosis) are recommended. Table 3. Recommended Evaluations Following Initial Diagnosis in Individuals with APRT Deficiency
System/Concern | Evaluation | Comment |
|---|---|---|
Renal | Measurement of serum creatinine (/or cystatin C) concentration | Urine screening for DHA crystalluria albuminuria or proteinuria |
Eyes | Consider ophthalmologic consultation. | In those w/ocular or vision symptoms Miscellaneous/ |
Other | Consultation w/clinical geneticist /or genetic counselor | DHA = 2,8-dihydroxyadenine Treatment of Manifestations Table 4. |
Targeted Treatment for Prevention/Reduction of Kidney Stones in Individuals with APRT Deficiency Goal | Treatment | Dosage |
Reduction of renal DHA excretion1 | Allopurinol2,3,4 |
Source: GeneReviews — "Adenine Phosphoribosyltransferase Deficiency"
Azathioprine and mercaptopurine should be avoided by individuals taking XOR inhibitors (allopurinol or febuxostat). Inhibition of xanthine oxidase may cause increased plasma concentrations of azathioprine or mercaptopurine, leading to toxicity.
Source: GeneReviews — "Adenine Phosphoribosyltransferase Deficiency"
View trials for inborn disorder of amino acid metabolism
No consensus surveillance guidelines have been established.
Table 6.
Recommended Surveillance for Individuals with APRT Deficiency
System/Concern | Evaluation | Frequency
| Measurement of eGFR derived from serum creatinine /or serum cystatin C | Every 6-12 mos or as clinically indicated
Urine microscopy for assessment of DHA crystalluria1,2,3 if direct DHA measurements not available4
Renal ultrasound5 | Periodically
| Assess medication compliance. | At least annually
eGFR = estimated glomerular filtration rate
1. Using first morning void urine specimen, if possible
2. In those receiving pharmacotherapy
3. Although not optimal, the absence of DHA crystals on urine microscopy can be considered indicative of adequate treatment. A highly significant correlation between 24-hour urinary DHA excretion and DHA crystalluria has been observed .
4. See for information about the UPLC-MS/MS assay for therapeutic monitoring .
5. To evaluate for new, asymptomatic kidney stones
Source: GeneReviews — "Adenine Phosphoribosyltransferase Deficiency"
No clinical trials have been registered for inborn disorder of amino acid metabolism.
234 publications have been identified in PubMed for inborn disorder of amino acid metabolism. Research spans Basic Science / Preclinical (22%), Case Report / Case Series (22%), and Review / Meta-Analysis (19%).
Research Type | Count | % of Total |
|---|---|---|
Laboratory research | 51 | 22% |
Patient case studies | 49 | 22% |
Research summaries | 43 | 19% |
Disease patterns and progression | 26 | 11% |
New treatment approaches | 26 | 11% |
Testing and diagnosis research | 24 | 11% |
Clinical study results | 7 | 3% |
Other research | 1 | 0% |
Suresh Kumar Bindu BN (2026). [PMID: 41500709](https://pubmed.ncbi.nlm.nih.gov/41500709/). *BMJ Case Rep*. [Case Report / Case Series]
Ueyanagi Y (2026). [PMID: 41897644](https://pubmed.ncbi.nlm.nih.gov/41897644/). *Diagnostics (Basel)*. [Basic Science / Preclinical]
Stone WL (2026). [PMID: 28846219](https://pubmed.ncbi.nlm.nih.gov/28846219/). *Unknown Journal*. [Review / Meta-Analysis]
Preisner F (2026). [PMID: 41485880](https://pubmed.ncbi.nlm.nih.gov/41485880/). *J Inherit Metab Dis*. [Case Report / Case Series]
Daley SF (2026). [PMID: 30570999](https://pubmed.ncbi.nlm.nih.gov/30570999/). *Unknown Journal*. [Review / Meta-Analysis]
Nimmana BK (2026). [PMID: 32491436](https://pubmed.ncbi.nlm.nih.gov/32491436/). *Unknown Journal*. [Review / Meta-Analysis]
Schweizer U (2026). [PMID: 41719757](https://pubmed.ncbi.nlm.nih.gov/41719757/). *Redox Biol*. [Review / Meta-Analysis]
Woodcock J (2026). [PMID: 42066821](https://pubmed.ncbi.nlm.nih.gov/42066821/). *Free Radic Biol Med*. [Gene Therapy / Novel Therapeutics]
Wei HY (2026). [PMID: 42130351](https://pubmed.ncbi.nlm.nih.gov/42130351/). *Zhongguo Dang Dai Er Ke Za Zhi*. [Review / Meta-Analysis]
Lu F (2026). [PMID: 42039436](https://pubmed.ncbi.nlm.nih.gov/42039436/). *bioRxiv*. [Basic Science / Preclinical]
Febuxostat2 | 80 mg/day5 | May be more efficacious than allopurinol6. Febuxostat dose should not routinely be reduced in those w/impaired kidney function. |
Reduction of urine DHA supersaturation crystallization | Ample fluid intake | NA |
Treatment of Manifestations in Individuals with APRT Deficiency Manifestation/Concern | Treatment | Consideration/Other DHA kidney |
stones1 | Standard surgical management | Incl extracorporeal shock wave lithotripsy |
CKD2 | Aggressive management of hypertension | Consider ACE inhibitors or angiotensin-receptor blockers in those w/proteinuria. Standard reduction of cardiovascular risk factors |
ESRD3 | Dialysis | It is not known if patients on dialysis benefit from allopurinol /or febuxostat therapy, unless a kidney transplant is planned. Kidney transplant |
Recommended Surveillance for Individuals with APRT Deficiency System/Concern | Evaluation | Frequency |
Renal | Measurement of eGFR derived from serum creatinine /or serum cystatin C | Every 6-12 mos or as clinically indicated Urine microscopy for assessment of DHA crystalluria1,2,3 if direct DHA measurements not available4 Renal ultrasound5 |
Other | Assess medication compliance. | At least annually eGFR = estimated glomerular filtration rate 1. |