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Joubert syndrome (JS) is characterized by congenital malformation of the brainstem and agenesis or hypoplasia of the cerebellar vermis leading to an abnormal respiratory pattern, nystagmus, hypotonia, ataxia, and delay in achieving motor milestones.
No HPO annotations are available for this condition.
Age of onset: at birth, adolescence, before birth.
The diagnosis of oral-facial-digital syndrome type I (OFD1) is suspected at birth in some infants on the basis of characteristic oral, facial, and digital anomalies; in other instances, the diagnosis is suspected only after polycystic kidney disease is identified in later childhood or adulthood. Almost all affected individuals with OFD1 are female; however, a few affected males have been reported. Most affected males are described as malformed fetuses delivered by a female with OFD1. To date, 234 individuals have been identified with a pathogenic variant in OFD1 . The following description of the phenotypic features associated with this condition is based on these reports. Table 2. Oral-Facial-Digital Syndrome Type I: Frequency of Select Features
No consensus clinical diagnostic criteria for oral-facial-digital syndrome type I (OFD1) have been published.
OFD1 should be suspected in females with typical oral, facial, and digital findings, polycystic kidney disease, and/or milia. The oral, facial, and digital findings are also found in other oral-facial-digital syndromes. OFD1 is characterized by renal cystic disease in approximately 50% of individuals and by the X-linked inheritance pattern in families with more than one affected individual. Almost all individuals with OFD1 are female; however, a few affected males have been reported. Most affected males are described as malformed fetuses delivered by an affected female.
No approved treatments are currently available for Joubert syndrome. The disease remains an area of unmet medical need.
No clinical practice guidelines for oral-facial-digital syndrome type I (OFD1) have been published. Evaluations Following Initial Diagnosis To establish the extent of disease and needs in an individual diagnosed with OFD1, the evaluations summarized (if not performed as part of the evaluation that led to the diagnosis) are recommended. Table 5. Oral-Facial-Digital Syndrome Type I: Recommended Evaluations
Table 7. Oral-Facial-Digital Syndrome Type I: Recommended Surveillance
System/Concern |
|---|
1 clinical trial registered, 1 recruiting. Interventions under study include other interventions. Research is primarily sponsored by academic and government institutions.
138 publications have been identified in PubMed for Joubert syndrome. Research spans Case Report / Case Series (44%), Basic Science / Preclinical (30%), and Review / Meta-Analysis (14%).
Research Type | Count | % of Total |
|---|---|---|
Patient case studies | 61 | 44% |
Data assembled from 5 of 12 sources · Last updated Sep 19, 2026, 8:50 AM UTC
Patient Advocacy Groups (PAGs) provide support, resources, and community for patients and caregivers.
European rare disease database
Genetic and Rare Diseases Info Center
Common questions about Joubert syndrome
Feature | % of Persons w/Feature | Comment |
|---|---|---|
Oral manifestations | 97%-100% | Dental tongue abnormalities, aberrant oral frenulae, bifid uvula |
Facial features | 60%-80% | Dysmorphisms, frontal bossing, cleft lip/ pseudocleft of upper lip |
Digit anomalies | 50%-60% | Syndactyly, clinodactyly, polydactyly, brachydactyly |
Brain malformations | 65% | Hydrocephalus, porencephaly, corpus callosum abnormalities, cortical dysgenesis |
Polycystic kidney disease | 50% | — |
Intellectual disability | ~50% | Mild to severe |
Milia | 10% | Oral manifestations. The tongue is lobulated. Tongue nodules, which are usually hamartomas or lipomas, also occur in at least one third of individuals with OFD1. Ankyloglossia attributable to a short lingual frenulum is common. |
Source: GeneReviews — "Oral-Facial-Digital Syndrome Type I"
Clinical Features
Oral
Source: GeneReviews — "Oral-Facial-Digital Syndrome Type I"
The differential diagnosis of oral-facial-digital syndrome type I (OFD1) includes other oral-facial-digital syndromes and cystic renal diseases. Table 4. Genes of Interest in the Differential Diagnosis of Oral-Facial-Digital Syndrome Type I
Gene(s) | Disorder | MOI | Distinctive Features/ Comment |
|---|---|---|---|
C2CD3 | C2CD3-related OFD(OMIM 615948)/JS-OFD | AR | Severe microcephaly ID. Brain MRI shows vermis hypoplasia MTS. |
CEP164 | CEP164-related OFD1 | AR | Postaxial polydactyly, hypotonia, cerebral malformations, hydronephrosis, urogenital abnormalities. (CEP164 is also assoc w/nephronophthisis.) |
CLUAP1 | CLUAP1-relatedJS-OFD2 | AR | Epiglottis cleft, short limbs, ID. Brain MRI shows MTS. One individual reported to date. |
CPLANE1(C5orf42) | CPLANE1-related OFD (OMIM 277170)/ JS-OFD | AR | Polydactyly (particularly central) cerebellar malformations. Renal agenesis dysplasia have been described. Brain MRI may show MTS.3 |
DDX59 | DDX59-related OFD (OMIM 174300) | AR | Polydactyly median cleft lip only. Hyperplastic frenula reported in 1 person. |
FAM149B1 | FAM149B1-related JS (OMIM 618763) | AR | Macrocephaly. Brain MRI shows MTS. Reported in 1 family to date. |
IFT57 | IFT57-related OFD (OMIM 617927) | AR | Short stature, skeletal dysplasia, brachymesophalangia |
INTU | INTU-related OFD (OMIM 617926) | AR | Cardiac defects, deafness, polydactyly. (Also assoc w/INTU-related SRPS [OMIM 617925].) |
KIAA0753(OFIP) | KIAA0753-related OFD (OMIM 617127) | AR | Polydactyly (particularly postaxial). Brain MRI shows vermis hypoplasia MTS. (Also assoc w/KIAA0753-related short-rib thoracic dysplasia [OMIM 619479] JS [OMIM 619476].) |
NEK1 | NEK1-related OFD2 (Mohr syndrome)4 | AR | Dental agenesis, maxillary hypoplasia, conductive hearing loss, bilateral tortuosity of retinal veins. (Also assoc w/NEK1-related SRPS [OMIM 263520].) |
SCLT1 | SCLT1-related OFD4 | AR | Microcephaly, coloboma, choanal atresia, congenital heart disease, agenesis of corpus callosum |
SCNM1 | SCNM1-related OFD (OMIM 620107) | AR | Postaxial polydactyly, tongue nodules, abnormalities of incisors, cleft palate, retrognathia |
TBC1D32 | TBC1D32-related OFD4 | AR | Microcephaly, coloboma, choanal atresia, agenesis of corpus callosum, congenital heart disease, seizures. 1 person described to date. |
TCTN1 | TCTN1-related JS | AR | Polydactyly cerebellar malformations |
TCTN3 | TCTN3-related OFD4(Mohr-Majewski)(OMIM 258860)/JS-OFD | AR | Tibial involvement polydactyly are primary manifestations. Micrognathia. Other findings incl pectus excavatum short stature. |
TMEM107 | TMEM107-related OFD (OMIM 617563)/ JS-OFD | AR | Postaxial polydactyly. ID. Brain MRI shows vermis hypoplasia MTS. |
TMEM138 | TMEM138-related OFD4 | AR | Brain MRI shows vermis hypoplasia MTS. |
Source: GeneReviews — "Oral-Facial-Digital Syndrome Type I"
Biomarker and diagnostic research for Joubert syndrome has been reported in the published literature.
System/Concern | Evaluation | Comment |
|---|---|---|
ENT | Exam for oral manifestations that may affect feeding speech | — |
Dental | Dental eval | — |
Digit anomalies | Assess for digit anomalies. | Neurologic |
Behavior | Formal, age-appropriate assessment of development behavior | — |
Hearing | Audiology eval if cleft palate is present | — |
Genetic counseling | By genetics professionals1 | To inform affected persons their families re nature, MOI, implications of OFD1 to facilitate medical personal decision making Family support resources |
Oral-Facial-Digital Syndrome Type I: Treatment of Manifestations Manifestation/Concern | Treatment | Considerations/Other Oral manifestations |
Polydactyly | Surgical repair as recommended by orthopedist | — |
Seizures | Standardized treatment w/ASM by experienced neurologist | Many ASMs may be effective; none has been demonstrated effective specifically for this disorder.; Education of parents/caregivers1 |
Renal disease | Routine mgmt of renal disease, which may require hemodialysis or peritoneal dialysis renal transplantation | Development/ Behavioral manifestations |
Hearing impairment | Hearing aids may be helpful per otolaryngologist. | Community hearing services through early intervention or school district ADHD = attention-deficit/hyperactivity disorder; ASM = anti-seizure medication; IEP = individualized education plan Education of parents/caregivers regarding common seizure presentations is appropriate. |
Oral-Facial-Digital Syndrome Type I: Recommended Surveillance System/Concern | Evaluation | Frequency |
ENT | Assessment of speech development frequency of ear infections | Annually in children if cleft lip /or cleft palate is present |
Dental | Dental eval | Annually or as recommended by dentist in presence of dental abnormalities |
Neurologic | Assess for new seizures or changes in seizures. | As recommended by neurologist in those w/brain involvement Renal |
Source: GeneReviews — "Oral-Facial-Digital Syndrome Type I"
Search ClinicalTrials.gov in the US and EU Clinical Trials Register in Europe for access to information on clinical studies for a wide range of diseases and conditions. Note: There may not be clinical trials for this disorder.
Source: GeneReviews — "Oral-Facial-Digital Syndrome Type I"
1 trial found
Evaluation
Frequency |
|---|
ENT | Assessment of speech development frequency of ear infections | Annually in children if cleft lip /or cleft palate is present |
Dental | Dental eval | Annually or as recommended by dentist in presence of dental abnormalities |
Neurologic | Assess for new seizures or changes in seizures. | As recommended by neurologist in those w/brain involvement Renal |
Behavior | Monitor developmental progress, educational needs, for behavioral manifestations. | At each visit |
Hearing | Audiology eval | Annually |
Source: GeneReviews — "Oral-Facial-Digital Syndrome Type I"
Estimated prevalence: Unknown (Unknown prevalence).
Laboratory research |
42 |
30% |
Research summaries | 19 | 14% |
Disease patterns and progression | 7 | 5% |
Testing and diagnosis research | 4 | 3% |
New treatment approaches | 4 | 3% |
Clinical study results | 1 | 1% |
Alafghani R (2026). [PMID: 41965849](https://pubmed.ncbi.nlm.nih.gov/41965849/). *Hum Genomics*. [Epidemiology / Natural History]
Sai Ramya V (2026). [PMID: 41928867](https://pubmed.ncbi.nlm.nih.gov/41928867/). *JCEM Case Rep*. [Case Report / Case Series]
Kovalskaia VA (2026). [PMID: 42271513](https://pubmed.ncbi.nlm.nih.gov/42271513/). *Hum Genomics*. [Case Report / Case Series]
Ito M (2026). [PMID: 41809274](https://pubmed.ncbi.nlm.nih.gov/41809274/). *Cureus*. [Case Report / Case Series]
Ching K (2026). [PMID: 42064743](https://pubmed.ncbi.nlm.nih.gov/42064743/). *MicroPubl Biol*. [Basic Science / Preclinical]
Chen SC (2026). [PMID: 42083040](https://pubmed.ncbi.nlm.nih.gov/42083040/). *J Biomed Sci*. [Review / Meta-Analysis]
Park JS (2026). [PMID: 42115107](https://pubmed.ncbi.nlm.nih.gov/42115107/). *Mov Disord Clin Pract*. [Case Report / Case Series]
Dababseh BH (2026). [PMID: 41550404](https://pubmed.ncbi.nlm.nih.gov/41550404/). *Clin Case Rep*. [Case Report / Case Series]
Mański Ł (2026). [PMID: 42073090](https://pubmed.ncbi.nlm.nih.gov/42073090/). *Children (Basel)*. [Review / Meta-Analysis]
Ren S (2026). [PMID: 41929917](https://pubmed.ncbi.nlm.nih.gov/41929917/). *Front Pediatr*. [Case Report / Case Series]
AI-curated news mentioning Joubert syndrome
Updated Aug 26, 2026
Recent research highlights the skeletal complications associated with Joubert syndrome, revealing a spectrum from low bone mineral density to severe secondary osteoporosis. This study underscores the need for monitoring bone health in affected individuals.
A case study highlights a 7-year-old girl with Joubert Syndrome and an NPC1 mutation, presenting with neuromotor developmental delay and ataxia. This case contributes to the understanding of the clinical manifestations associated with these rare genetic conditions.