Kisho is an information platform, not a medical provider. Nothing on this site constitutes medical advice, diagnosis, or treatment recommendations. All content is aggregated from publicly available sources (including ClinicalTrials.gov, PubMed, FDA.gov, and Orphanet) and is provided for informational purposes only. Clinical trial eligibility, treatment decisions, and any health-related actions should always be discussed with a qualified healthcare professional. Kisho does not endorse any specific therapy, organization, or clinical trial. Terms of use · Privacy policy
Features include very common findings: Hypertelorism, Upper eyelid coloboma, and Abnormal hair pattern; and common findings: Anal stenosis, Abnormality of the hairline, Nasolacrimal duct obstruction, and Omphalocele and others. 17 total HPO annotations.
Organ System | Phenotype Count | Example Features |
|---|---|---|
Brain and nerves | 1 | Global developmental delay |
Ocular abnormalities include ipsilateral colobomas of the upper eyelid (sometimes referred to as a Tessier number 10 cleft), corneopalpebral synechiae (i.e., adhesions between the eyelids and the cornea, also known as abortive cryptophthalmos), and microphthalmia/anophthalmia and/or cryptophthalmos. Anomalies may be unilateral or bilateral; the severity may differ between the two eyes. Visual impairment may result directly from the ocular malformations or indirectly from exposure keratopathy. The long-term visual outcome depends on the severity of the ocular malformations and is poor for individuals with bilateral complete cryptophthalmos. In those with milder ocular malformations, such as upper eyelid colobomas, vision is typically intact.
Source: GeneReviews — "FREM1 Autosomal Recessive Disorders"
FREM1 encodes FRAS1 related extracellular matrix 1 (2,179 aa). Extracellular matrix protein that plays a role in epidermal differentiation and is required for epidermal adhesion during embryonic development Highest expression in Uterus (12.8 TPM) and Brain Cerebellar Hemisphere (11.8 TPM).
Oculotrichoanal syndrome is associated with mutations in the FREM1 gene on chromosome 9.
FREM1 is classified as a druggable target (Druggable Genome category) with score 0.0.
Genotype-phenotype correlations have not been possible to date given the rarity of the condition and limited number of pathogenic variants described.
Source: GeneReviews — "FREM1 Autosomal Recessive Disorders"
No consensus clinical diagnostic criteria for FREM1 autosomal recessive disorders have been published.
A FREM1 autosomal recessive disorder should be suspected in an individual with clinical findings and/or family history of Manitoba oculotrichoanal (MOTA) syndrome, bifid nose with or without anorectal and renal anomalies (BNAR) syndrome, or congenital anomalies of kidney and urinary tract (CAKUT).
MOTA syndrome
Source: GeneReviews — "FREM1 Autosomal Recessive Disorders"
Disorders of known genetic cause in the differential diagnosis of Manitoba oculotrichoanal (MOTA) syndrome and bifid nose with or without anorectal and renal anomalies (BNAR) syndrome are listed in . Table 2. Genes of Interest in the Differential Diagnosis of MOTA Syndrome and BNAR Syndrome
Gene(s) | Disorder | MOI | Features of Disorder |
|---|---|---|---|
ALX4 | Frontonasal dysplasia (OMIM PS136760) | AR | Widely spaced eyes; Broad forehead; Widow's peak; Broad nasal root; absence of nasal tip formation; unilateral/bilateral cleft ala nasi1 |
EFNB1 |
Genetic testing for FREM1 is available. Testing is considered confirmatory for diagnosis.
No approved treatments are currently available for oculotrichoanal syndrome. The disease remains an area of unmet medical need.
No clinical practice guidelines for FREM1 autosomal recessive disorders have been published. In the absence of published guidelines, the following recommendations are based on the authors' personal experience managing individuals with this disorder.
To establish the extent of disease and needs in an individual diagnosed with a FREM1 autosomal recessive disorder, the evaluations summarized in , , or (depending on the phenotype), if not performed as part of the evaluation that led to the diagnosis, are recommended.
Table 3.
MOTA Syndrome: Recommended Evaluations Following Initial Diagnosis
System/Concern | Evaluation | Comment
| Ophthalmologic eval | For coloboma /or keratopathy
ENT | Eval for bifid nose/ notched ala nasi | Referral to plastic surgeon as needed
| Eval for anal anomalies, omphalocele, /or umbilical hernia | Referral to surgeon if present
| Kidney imaging, kidney functional analysis | For kidney malformation function
| By genetics professionals1 | To obtain a pedigree inform affected persons their families re nature, MOI, implications of MOTA syndrome to facilitate medical personal decision making
MOI = mode of inheritance; MOTA = Manitoba oculotrichoanal
1. Clinical geneticist, certified genetic counselor, certified genetic nurse, genetics advanced practice provider (nurse practitioner or physician assistant)
Table 4.
BNAR Syndrome: Recommended Evaluations Following Initial Diagnosis
Source: GeneReviews — "FREM1 Autosomal Recessive Disorders"
Search ClinicalTrials.gov in the US and EU Clinical Trials Register in Europe for access to information on clinical studies for a wide range of diseases and conditions. Note: There may not be clinical trials for this disorder.
Source: GeneReviews — "FREM1 Autosomal Recessive Disorders"
View trials for oculotrichoanal syndrome
To monitor existing manifestations, the individual's response to supportive care, and the emergence of new manifestations, the evaluations summarized in are recommended.
Table 7.
FREM1 Autosomal Recessive Disorders: Recommended Surveillance
System/Concern | Evaluation | Frequency
| Imaging kidney function assessment | In those w/kidney disease w/frequency per nephrologist
| Assess family need for social work support (e.g., palliative/respite care, home nursing, other local resources), care coordination, or follow-up genetic counseling if new questions arise (e.g., family planning). | At each visit
Source: GeneReviews — "FREM1 Autosomal Recessive Disorders"
Phenotype severity distribution: 3 very common features, 7 common features.
Estimated prevalence: <1 in 1,000,000 (VERY_RARE).
No clinical trials have been registered for oculotrichoanal syndrome.
5 publications have been identified in PubMed for oculotrichoanal syndrome. Research spans Review / Meta-Analysis (50%) and Case Report / Case Series (50%).
Feng X (2026). [PMID: 40605465](https://pubmed.ncbi.nlm.nih.gov/40605465/). *Clin Genet*. [Case Report / Case Series]
Sun M (2025). [PMID: 40692799](https://pubmed.ncbi.nlm.nih.gov/40692799/). *Front Pediatr*. [Review / Meta-Analysis]
Russo M (2025). [PMID: 40038803](https://pubmed.ncbi.nlm.nih.gov/40038803/). *Ital J Pediatr*. [Review / Meta-Analysis]
Nabhan MS (2025). [PMID: 41052809](https://pubmed.ncbi.nlm.nih.gov/41052809/). *BMJ Case Rep*. [Case Report / Case Series]
Data assembled from 7 of 12 sources · Last updated Sep 19, 2026, 4:33 PM UTC
Online Mendelian Inheritance in Man
European rare disease database
Genetic and Rare Diseases Info Center
Craniofrontonasal dysplasia (OMIM 304110)
XL |
In females:3; Widely spaced eyes; Broad nasal bridge, bifid nasal tip |
GRIP1 | Fraser syndrome (OMIM PS219000) | AR | Anophthalmia/microphthalmia, cryptophthalmos, eyelid colobomas, widely spaced eyes; Wedge-shaped lateral anterior hairline; Bifid nasal tip/ notched ala nasi; Anal stenosis or imperforate anus4 |
Donnai-Barrow syndrome | AR | Widely spaced eyes; Omphalocele | Agenesis of corpus callosum; Sensorineural hearing loss; Diaphragmatic hernia |
MED12 | FG syndrome type 1 (See MED12-Related Disorders.) | XL | In male infants:; Widely spaced eyes; Anteriorly placed anus, anal stenosis |
SALL1-related Townes-Brocks syndrome | AD | Anteriorly placed anus, imperforate anus, anal stenosis AD = autosomal dominant; AR = autosomal recessive; BNAR = bifid nose with or without anorectal and renal anomalies; MOI = mode of inheritance; MOTA = Manitoba oculotrichoanal; XL = X-linked 1. 2. | — |
Source: GeneReviews — "FREM1 Autosomal Recessive Disorders"