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A rare neurodevelopmental disorder in the ciliopathy group that is lethal in males and characterized by variable anomalies including external malformations (craniofacial and digital), and possible involvement of the central nervous system (CNS) and of viscera (kidneys, pancreas and ovaries) in females.
Features include very common findings: Median cleft upper lip, Hypertelorism, Lobulated tongue, and High palate and others; and common findings: Seizure, Polycystic kidney dysplasia, Intellectual disability, and Cleft palate and others. 98 total HPO annotations.
Organ System | Phenotype Count | Example Features |
|---|---|---|
Arms and legs | 10 | Radial deviation of finger, Short 2nd toe, Hand polydactyly |
Head and neck | 8 | Median cleft upper lip, Cleft palate, Microcephaly |
Brain and nerves | 7 | Seizure, Hydrocephalus, Intellectual disability |
Digestive system | 5 | Hepatic cysts, Pancreatic cysts, Liver scarring (fibrosis) (hepatic fibrosis) |
Kidneys and urinary system | 4 | Polycystic kidney dysplasia, Protein in the urine (proteinuria), Multicystic kidney dysplasia |
Skin | 3 | Alopecia, Tongue nodules, Dry skin |
Bones and joints | 3 | Low bone density (reduced bone mineral density), Bone and joint problems (abnormality of the skeletal system), Hypoplasia of the zygomatic bone |
Ears | 2 | Hearing loss (hearing impairment), Chronic otitis media |
Heart and blood vessels | 2 | Abnormal heart morphology, Hypertension |
Growth and development | 1 | Short stature |
Muscles | 1 | Brain shrinkage (cerebral atrophy) |
Lab test results | 1 | Elevated circulating hepatic transaminase concentration |
Age of onset: adulthood.
The diagnosis of oral-facial-digital syndrome type I (OFD1) is suspected at birth in some infants on the basis of characteristic oral, facial, and digital anomalies; in other instances, the diagnosis is suspected only after polycystic kidney disease is identified in later childhood or adulthood. Almost all affected individuals with OFD1 are female; however, a few affected males have been reported. Most affected males are described as malformed fetuses delivered by a female with OFD1. To date, 234 individuals have been identified with a pathogenic variant in OFD1 . The following description of the phenotypic features associated with this condition is based on these reports. Table 2. Oral-Facial-Digital Syndrome Type I: Frequency of Select Features
Feature | % of Persons w/Feature | Comment |
|---|---|---|
Oral manifestations | 97%-100% | Dental tongue abnormalities, aberrant oral frenulae, bifid uvula |
OFD1 encodes OFD1 centriole and centriolar satellite protein (1,012 aa). Component of the centrioles controlling mother and daughter centrioles length. Recruits to the centriole IFT88 and centriole distal appendage-specific proteins including CEP164. Highest expression in Ovary (47.1 TPM) and Fallopian Tube (44.0 TPM).
Orofaciodigital syndrome I is associated with mutations in the OFD1 gene on chromosome X.
The OFD1 protein participates in FGFR2(22-767)-OFD1(38-1012) fusion, p-6Y-FGFR2(22-767)-OFD1(38-1012) fusion, and C2CD3 and OFD1 recruit 5 distal appendage proteins to the centriole pathways.
OFD1 is classified as a druggable target with score 0.0.
No convincing genotype-phenotype correlations have been reported. The majority of OFD1 pathogenic variants are localized within exon 16.
Source: GeneReviews — "Oral-Facial-Digital Syndrome Type I"
OFD1 appears to be highly penetrant, although highly variable in expression. In some reports, renal cysts are the only apparent manifestation in affected females .
Source: GeneReviews — "Oral-Facial-Digital Syndrome Type I"
No consensus clinical diagnostic criteria for oral-facial-digital syndrome type I (OFD1) have been published.
OFD1 should be suspected in females with typical oral, facial, and digital findings, polycystic kidney disease, and/or milia. The oral, facial, and digital findings are also found in other oral-facial-digital syndromes. OFD1 is characterized by renal cystic disease in approximately 50% of individuals and by the X-linked inheritance pattern in families with more than one affected individual. Almost all individuals with OFD1 are female; however, a few affected males have been reported. Most affected males are described as malformed fetuses delivered by an affected female.
Clinical Features
Oral
Source: GeneReviews — "Oral-Facial-Digital Syndrome Type I"
The differential diagnosis of oral-facial-digital syndrome type I (OFD1) includes other oral-facial-digital syndromes and cystic renal diseases. Table 4. Genes of Interest in the Differential Diagnosis of Oral-Facial-Digital Syndrome Type I
Gene(s) | Disorder | MOI | Distinctive Features/ Comment |
|---|---|---|---|
C2CD3 | C2CD3-related OFD(OMIM 615948)/JS-OFD | AR | Severe microcephaly ID. Brain MRI shows vermis hypoplasia MTS. |
CEP164 | CEP164-related OFD1 |
Genetic testing for OFD1 is available. Testing is considered confirmatory for diagnosis.
Biomarker and diagnostic research for orofaciodigital syndrome I has been reported in the published literature.
No approved treatments are currently available for orofaciodigital syndrome I. The disease remains an area of unmet medical need.
No clinical practice guidelines for oral-facial-digital syndrome type I (OFD1) have been published. Evaluations Following Initial Diagnosis To establish the extent of disease and needs in an individual diagnosed with OFD1, the evaluations summarized (if not performed as part of the evaluation that led to the diagnosis) are recommended. Table 5. Oral-Facial-Digital Syndrome Type I: Recommended Evaluations
System/Concern | Evaluation | Comment |
|---|---|---|
ENT | Exam for oral manifestations that may affect feeding speech | — |
Dental | Dental eval | — |
Digit anomalies | Assess for digit anomalies. | Neurologic |
Behavior | Formal, age-appropriate assessment of development behavior | — |
Hearing | Audiology eval if cleft palate is present | — |
Genetic counseling | By genetics professionals1 |
Source: GeneReviews — "Oral-Facial-Digital Syndrome Type I"
Search ClinicalTrials.gov in the US and EU Clinical Trials Register in Europe for access to information on clinical studies for a wide range of diseases and conditions. Note: There may not be clinical trials for this disorder.
Source: GeneReviews — "Oral-Facial-Digital Syndrome Type I"
View trials for orofaciodigital syndrome I
Table 7. Oral-Facial-Digital Syndrome Type I: Recommended Surveillance
System/Concern | Evaluation | Frequency |
|---|---|---|
ENT | Assessment of speech development frequency of ear infections | Annually in children if cleft lip /or cleft palate is present |
Dental | Dental eval | Annually or as recommended by dentist in presence of dental abnormalities |
Neurologic | Assess for new seizures or changes in seizures. | As recommended by neurologist in those w/brain involvement Renal |
Behavior | Monitor developmental progress, educational needs, for behavioral manifestations. | At each visit |
Hearing | Audiology eval | Annually |
Source: GeneReviews — "Oral-Facial-Digital Syndrome Type I"
Phenotype severity distribution: 9 very common features, 23 common features.
Estimated prevalence: Unknown (Unknown prevalence).
No clinical trials have been registered for orofaciodigital syndrome I.
10 publications have been identified in PubMed for orofaciodigital syndrome I. Research spans Case Report / Case Series (40%), Basic Science / Preclinical (40%), and Diagnostic / Biomarker (10%).
Research Type | Count | % of Total |
|---|---|---|
Patient case studies | 4 | 40% |
Laboratory research | 4 | 40% |
Testing and diagnosis research | 1 | 10% |
Research summaries | 1 | 10% |
van der Westhuizen J (2026). [PMID: 41392822](https://pubmed.ncbi.nlm.nih.gov/41392822/). *American journal of medical genetics. Part A*. [Diagnostic / Biomarker]
Yang M (2025). [PMID: 40059580](https://pubmed.ncbi.nlm.nih.gov/40059580/). *Journal of clinical laboratory analysis*. [Basic Science / Preclinical]
Jones N (2025). [PMID: 41064626](https://pubmed.ncbi.nlm.nih.gov/41064626/). *Case reports in nephrology and dialysis*. [Case Report / Case Series]
Bertiaux E (2025). [PMID: 40667239](https://pubmed.ncbi.nlm.nih.gov/40667239/). *bioRxiv*. [Basic Science / Preclinical]
García-Bohórquez B (2025). [PMID: 40319332](https://pubmed.ncbi.nlm.nih.gov/40319332/). *Human genomics*. [Case Report / Case Series]
Iturrate A (2025). [PMID: 41291844](https://pubmed.ncbi.nlm.nih.gov/41291844/). *Human genomics*. [Review / Meta-Analysis]
Che R (2025). [PMID: 40399278](https://pubmed.ncbi.nlm.nih.gov/40399278/). *Nature communications*. [Basic Science / Preclinical]
Lo Giudice M (2025). [PMID: 40565597](https://pubmed.ncbi.nlm.nih.gov/40565597/). *Genes (Basel)*. [Case Report / Case Series]
Sawada Y (2025). [PMID: 40475304](https://pubmed.ncbi.nlm.nih.gov/40475304/). *Kidney Med*. [Case Report / Case Series]
Hannes L (2024). [PMID: 38158857](https://pubmed.ncbi.nlm.nih.gov/38158857/). *Genetics in medicine : official journal of the American College of Medical Genetics*. [Basic Science / Preclinical]
Data assembled from 7 of 12 sources · Last updated Sep 19, 2026, 6:57 PM UTC
Online Mendelian Inheritance in Man
European rare disease database
Genetic and Rare Diseases Info Center
60%-80% |
Dysmorphisms, frontal bossing, cleft lip/ pseudocleft of upper lip |
Digit anomalies | 50%-60% | Syndactyly, clinodactyly, polydactyly, brachydactyly |
Brain malformations | 65% | Hydrocephalus, porencephaly, corpus callosum abnormalities, cortical dysgenesis |
Polycystic kidney disease | 50% | — |
Intellectual disability | ~50% | Mild to severe |
Milia | 10% | Oral manifestations. The tongue is lobulated. Tongue nodules, which are usually hamartomas or lipomas, also occur in at least one third of individuals with OFD1. Ankyloglossia attributable to a short lingual frenulum is common. |
Source: GeneReviews — "Oral-Facial-Digital Syndrome Type I"
AR
Postaxial polydactyly, hypotonia, cerebral malformations, hydronephrosis, urogenital abnormalities. (CEP164 is also assoc w/nephronophthisis.) |
CLUAP1 | CLUAP1-relatedJS-OFD2 | AR | Epiglottis cleft, short limbs, ID. Brain MRI shows MTS. One individual reported to date. |
CPLANE1(C5orf42) | CPLANE1-related OFD (OMIM 277170)/ JS-OFD | AR | Polydactyly (particularly central) cerebellar malformations. Renal agenesis dysplasia have been described. Brain MRI may show MTS.3 |
DDX59 | DDX59-related OFD (OMIM 174300) | AR | Polydactyly median cleft lip only. Hyperplastic frenula reported in 1 person. |
FAM149B1 | FAM149B1-related JS (OMIM 618763) | AR | Macrocephaly. Brain MRI shows MTS. Reported in 1 family to date. |
IFT57 | IFT57-related OFD (OMIM 617927) | AR | Short stature, skeletal dysplasia, brachymesophalangia |
INTU | INTU-related OFD (OMIM 617926) | AR | Cardiac defects, deafness, polydactyly. (Also assoc w/INTU-related SRPS [OMIM 617925].) |
KIAA0753(OFIP) | KIAA0753-related OFD (OMIM 617127) | AR | Polydactyly (particularly postaxial). Brain MRI shows vermis hypoplasia MTS. (Also assoc w/KIAA0753-related short-rib thoracic dysplasia [OMIM 619479] JS [OMIM 619476].) |
NEK1 | NEK1-related OFD2 (Mohr syndrome)4 | AR | Dental agenesis, maxillary hypoplasia, conductive hearing loss, bilateral tortuosity of retinal veins. (Also assoc w/NEK1-related SRPS [OMIM 263520].) |
SCLT1 | SCLT1-related OFD4 | AR | Microcephaly, coloboma, choanal atresia, congenital heart disease, agenesis of corpus callosum |
SCNM1 | SCNM1-related OFD (OMIM 620107) | AR | Postaxial polydactyly, tongue nodules, abnormalities of incisors, cleft palate, retrognathia |
TBC1D32 | TBC1D32-related OFD4 | AR | Microcephaly, coloboma, choanal atresia, agenesis of corpus callosum, congenital heart disease, seizures. 1 person described to date. |
TCTN1 | TCTN1-related JS | AR | Polydactyly cerebellar malformations |
TCTN3 | TCTN3-related OFD4(Mohr-Majewski)(OMIM 258860)/JS-OFD | AR | Tibial involvement polydactyly are primary manifestations. Micrognathia. Other findings incl pectus excavatum short stature. |
TMEM107 | TMEM107-related OFD (OMIM 617563)/ JS-OFD | AR | Postaxial polydactyly. ID. Brain MRI shows vermis hypoplasia MTS. |
TMEM138 | TMEM138-related OFD4 | AR | Brain MRI shows vermis hypoplasia MTS. |
Source: GeneReviews — "Oral-Facial-Digital Syndrome Type I"
Oral-Facial-Digital Syndrome Type I: Treatment of Manifestations Manifestation/Concern | Treatment | Considerations/Other Oral manifestations |
Polydactyly | Surgical repair as recommended by orthopedist | — |
Seizures | Standardized treatment w/ASM by experienced neurologist | Many ASMs may be effective; none has been demonstrated effective specifically for this disorder.; Education of parents/caregivers1 |
Renal disease | Routine mgmt of renal disease, which may require hemodialysis or peritoneal dialysis renal transplantation | Development/ Behavioral manifestations |
Hearing impairment | Hearing aids may be helpful per otolaryngologist. | Community hearing services through early intervention or school district ADHD = attention-deficit/hyperactivity disorder; ASM = anti-seizure medication; IEP = individualized education plan Education of parents/caregivers regarding common seizure presentations is appropriate. |
Oral-Facial-Digital Syndrome Type I: Recommended Surveillance System/Concern | Evaluation | Frequency |
ENT | Assessment of speech development frequency of ear infections | Annually in children if cleft lip /or cleft palate is present |
Dental | Dental eval | Annually or as recommended by dentist in presence of dental abnormalities |
Neurologic | Assess for new seizures or changes in seizures. | As recommended by neurologist in those w/brain involvement Renal |