Kisho is an information platform, not a medical provider. Nothing on this site constitutes medical advice, diagnosis, or treatment recommendations. All content is aggregated from publicly available sources (including ClinicalTrials.gov, PubMed, FDA.gov, and Orphanet) and is provided for informational purposes only. Clinical trial eligibility, treatment decisions, and any health-related actions should always be discussed with a qualified healthcare professional. Kisho does not endorse any specific therapy, organization, or clinical trial. Terms of use · Privacy policy
Smith-Magenis syndrome (SMS) is a rare neurodevelopmental disorder caused by a chromosomal deletion of the 17p11.2 region, which includes the RAI1 gene, or by pathogenic variants in RAI1 itself. The RAI1 gene has been classified as DEFINITIVE for causation of this syndrome by ClinGen. According to GeneReviews, more than 400 individuals with deletions or pathogenic variants involving RAI1 have been reported in the literature. The birth incidence is estimated at approximately 1:25,000 births, with actual prevalence potentially closer to 1:15,000, per GeneReviews. The Orphanet-sourced prevalence estimate in this packet places SMS in the 1–9 per 100,000 category. SMS is characterized by a clinically recognizable pattern that includes intellectual disability, distinctive craniofacial features evolving with age, self-injurious behavior, and a pervasive sleep disorder attributed to an inverted melatonin secretion circadian rhythm. The condition affects multiple organ systems and requires lifelong multidisciplinary care.
The phenotypic features of Smith-Magenis syndrome span neurological, behavioral, craniofacial, and musculoskeletal domains. Per HPO data, intellectual disability (100%), strabismus (100%), square facial appearance (100%), truncal obesity (100%), hypotonia (100%), and global developmental delay (100%) are present in essentially all reported individuals. GeneReviews describes a subtly distinctive facial appearance — including midface retrusion, malar flattening, a broad face, and a wide nasal bridge — that typically becomes more evident with age. Hoarse voice is reported in 80–99% of individuals per HPO data. Behavioral features present in 80–99% of individuals include self-mutilation, encompassing behaviors such as head banging, hand squeezing, and skin picking, as well as pronounced sleep disturbance. Brachydactyly is also noted at this frequency. GeneReviews characterizes the circadian sleep disorder as driven by an inverted melatonin secretion rhythm, with affected individuals often sleeping during the day and remaining awake at night. Less frequent features (30–79%) per HPO data include broad face and, per GeneReviews, scoliosis. Affected organ systems documented in the packet include the ear and nervous system.
Smith-Magenis syndrome results from heterozygous deletion of chromosome 17p11.2, encompassing the RAI1 gene, or from pathogenic variants within RAI1 itself. RAI1 is classified as DEFINITIVE for SMS causation by ClinGen, reflecting the strongest level of gene-disease evidence. Per GeneReviews, genotype-phenotype correlations have been proposed based on the underlying molecular mechanism: individuals with 17p11.2 deletions that include RAI1 tend to exhibit greater cognitive impairment than those with isolated RAI1 point mutations, reflecting the contribution of haploinsufficiency of additional genes within the deleted segment. The molecular mechanism field is not certified in the current packet beyond what GeneReviews documents. The deletion typically arises as a de novo event, per GeneReviews genetic counseling content, though the inheritance field is not certified in this packet.
Per GeneReviews, no consensus clinical diagnostic criteria for Smith-Magenis syndrome have been formally published. The syndrome is suspected in individuals who present with the combination of a subtly distinctive and evolving facial appearance, intellectual disability, behavioral abnormalities including self-injurious behaviors, and a characteristic sleep disorder. GeneReviews identifies chromosomal microarray analysis as the primary confirmatory tool for detecting 17p11.2 deletions, which captures both typical and atypical deletion sizes. Fluorescence in situ hybridization (FISH) targeting 17p11.2 has historically been used but may miss smaller deletions or atypical boundaries. In cases with clinical features suggestive of SMS but negative microarray results, sequencing of the RAI1 gene is performed to identify pathogenic point variants. The diagnostic methods field is not certified in the current packet beyond GeneReviews guidance.
No treatments are specifically FDA-approved for Smith-Magenis syndrome. Per GeneReviews, there is no cure for SMS; care centers on supportive interventions designed to improve quality of life, maximize function, and reduce complications across the lifespan. Multidisciplinary management is the standard approach, involving specialists in neurology, behavioral health, sleep medicine, orthopedics, ophthalmology, and otolaryngology, among others. GeneReviews describes the sleep disorder — driven by an inverted melatonin circadian rhythm — as a primary management target. Melatonin has received orphan drug designation for the treatment of SMS in combination with a beta-blocker; this designation is investigational and does not indicate FDA approval. GeneReviews notes that psychoactive medications for sleep management and behavioral challenges have been used with mixed response, with no single regimen having demonstrated consistent efficacy and adverse reactions having been observed in some individuals. A GeneReviews section on agents to avoid is available, reflecting the particular sensitivity of this population to certain psychoactive compounds.
4 trials found
The long-term course of Smith-Magenis syndrome is shaped by the severity of intellectual disability, the degree of behavioral challenges including self-injurious behaviors, and the extent of sleep disruption. GeneReviews documents more than 400 individuals with deletion or pathogenic RAI1 variants and describes a clinically recognizable phenotype that persists and evolves across the lifespan. The behavioral and sleep manifestations typically continue into adulthood, with adults requiring ongoing multisystem surveillance and supportive care per GeneReviews guidance. GeneReviews describes genotype-phenotype correlations suggesting that individuals with the larger chromosomal deletion tend to experience greater cognitive impact than those with isolated RAI1 point mutations. Formal life expectancy data are not specified in the current packet, and the natural history field is not certified here.
No active clinical trial records are included in the current packet for Smith-Magenis syndrome. GeneReviews references ClinicalTrials.gov and the EU Clinical Trials Register as resources for current study listings, and notes that there may not be ongoing clinical trials for this disorder at any given time. Research interest centers on the role of RAI1 in chromatin remodeling and transcriptional regulation, as well as on the characteristic circadian rhythm abnormality and its pharmacological management. Melatonin-based regimens remain under active investigation, as reflected in the orphan drug designation for a melatonin-plus-beta-blocker combination. The PRISMS patient registry and advocacy network has supported natural history research and published management guidelines referenced by GeneReviews.
Data assembled from 10 of 12 sources · Last updated Oct 4, 2026, 3:02 AM UTC
Patient Advocacy Groups (PAGs) provide support, resources, and community for patients and caregivers.
Online Mendelian Inheritance in Man
European rare disease database
Genetic and Rare Diseases Info Center
AI-curated news mentioning Smith-Magenis syndrome
Updated May 24, 2026
A recent study identifies distinct neuropsychiatric profiles linked to 17p11.2 deletions and RAI1 variants in Smith-Magenis Syndrome. This research enhances understanding of the genetic underpinnings of the disorder.