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Features include always present findings: Dystonia, Low muscle tone (hypotonia), Ataxia, and Motor delay and others; and very common findings: CNS hypomyelination and Joint contracture. 39 total HPO annotations.
Organ System | Phenotype Count | Example Features |
|---|---|---|
Brain and nerves | 14 | Dystonia, Seizure, Ataxia |
Muscles | 5 | Shrinkage of the cerebellum (cerebellar atrophy), Low muscle tone (hypotonia), Brain atrophy |
Eyes | 2 | Nystagmus, Hypometric saccades |
Head and neck | 2 | High palate, Long face |
Bones and joints | 2 | Sideways curvature of the spine (scoliosis), Joint contracture |
Arms and legs | 2 | Limb dystonia, Limb ataxia |
NKX6-2-related disorder is characterized by a spectrum of progressive neurologic manifestations resulting from diffuse central nervous system hypomyelination. To date NKX6-2-related disorder has been reported in 25 individuals from 13 families [, , , ]. At the severe end of the spectrum is neonatal-onset nystagmus, severe spastic tetraplegia with joint contractures and scoliosis, and visual and hearing impairment, all of which rapidly progress resulting in death in early childhood.
Source: GeneReviews — "NKX6-2-Related Disorder"
NKX6-2 encodes NK6 homeobox 2 (277 aa). Transcription factor with repressor activity involved in the regulation of axon-glial interactions at myelin paranodes in oligodendrocytes. Binds to the consensus DNA sequence 5'-(A/T)TTAATGA-3'. Highest expression in Brain Spinal cord cervical c-1 (147.1 TPM) and Brain Substantia nigra (53.3 TPM).
Spastic ataxia 8, autosomal recessive, with hypomyelinating leukodystrophy is associated with mutations in the NKX6-2 gene on chromosome 10.
The NKX6-2 protein participates in PDX1-dependent synthesis of NKX6-1 protein, Duodeno-pancreatic endoderm cell produces primary multipotent pancreatic progenitor cell, and Ventral foregut endoderm cell produces primary multipotent pancreatic progenitor cell pathways.
NKX6-2 is classified as a druggable target (Transcription Factor category) with score 0.0.
NKX6-2-related disorder should be suspected in individuals with the following clinical and brain MRI findings.
Clinical findings
Onset between birth and age five years of either spasticity or hypotonia with rapid progression to spasticity (typically manifesting as spastic quadriplegia in those with early onset)
Motor delay or developmental delay in those with a more severe phenotype
Nystagmus
Visual impairment manifest in severely affected children as loss of visual fixation and ocular pursuit and in older individuals as severe limitation of eye movements
Hearing impairment
Ataxia
Dystonia particularly involving the upper limbs
Brain MRI findings
Source: GeneReviews — "NKX6-2-Related Disorder"
Hypomyelinating leukodystrophies and spastic ataxias (particularly when associated with hypomyelination) should be considered in the differential diagnosis of NKX6-2 related disorder. See . Table 2. Movement Disorders to Consider in the Differential Diagnosis of NKX6-2-Related Disorder
Disorder | Gene(s) | MOI | Overlapping Clinical Features | Distinguishing Clinical Features |
|---|---|---|---|---|
Onset | Movement disorder | Brain MRI | Other Pelizaeus-Merzbacher disease (PMD) (See PLP1 Disorders.) |
Genetic testing for NKX6-2 is available. Testing is considered confirmatory for diagnosis.
No approved treatments are currently available for spastic ataxia 8, autosomal recessive, with hypomyelinating leukodystrophy. The disease remains an area of unmet medical need.
Evaluations Following Initial Diagnosis To establish the extent of disease and needs in an individual diagnosed with NKX6-2-related disorder, the evaluations summarized (if not performed as part of the evaluation that led to the diagnosis) are recommended. Table 3. Recommended Evaluations Following Initial Diagnosis of NKX6-2-Related Disorder
System/Concern | Evaluation | Comment |
|---|---|---|
Constitutional | Height, weight, head circumference | Assess for evidence of failure to thrive. |
Eyes | Ophthalmologic eval | Assess for:; vision;; Abnormal ocular movement. |
Hearing | Audiologic eval | Assess for hearing loss. |
Cardiovascular | Consideration of echocardiogram | To screen for congenital heart defects Respiratory |
Musculoskeletal | Referral to specialist in pediatric pain mgmt | For those who have pain due to deforming joint contractures Referral to rehab specialist |
Genitourinary |
Source: GeneReviews — "NKX6-2-Related Disorder"
View trials for spastic ataxia 8, autosomal recessive, with hypomyelinating leukodystrophy
Table 5. Recommended Surveillance for Individuals with NKX6-2-Related Disorder
System/Concern | Evaluation | Frequency |
|---|---|---|
Eyes | Visual acuity eye movement | At each visit |
Hearing | Formal audiology assessment | As required Respiratory |
Feeding | Measurement of growth parameters | At each visit Eval of nutritional status safety of oral intake Neurologic |
Source: GeneReviews — "NKX6-2-Related Disorder"
Phenotype severity distribution: 10 always present features, 2 very common features, 14 common features.
Estimated prevalence: <1 in 1,000,000 (VERY_RARE).
No clinical trials have been registered for spastic ataxia 8, autosomal recessive, with hypomyelinating leukodystrophy.
2 publications have been identified in PubMed for spastic ataxia 8, autosomal recessive, with hypomyelinating leukodystrophy. Research spans Other (50%) and Epidemiology / Natural History (50%).
Kaur N (2025). [PMID: 39470296](https://pubmed.ncbi.nlm.nih.gov/39470296/). *Am J Med Genet A*. [Epidemiology / Natural History]
Takenaka Y (2024). [PMID: 39584967](https://pubmed.ncbi.nlm.nih.gov/39584967/). *Epigenomes*. [Other]
Data assembled from 7 of 12 sources · Last updated Sep 20, 2026, 5:35 PM UTC
Online Mendelian Inheritance in Man
European rare disease database
Genetic and Rare Diseases Info Center
PLP1 | XL | Infancy or early childhood | Pyramidal, extrapyramidal, cerebellar | Diffuse hypomyelination; cerebellar atrophy |
GJC2 | AR | Early childhood | Pyramidal, extrapyramidal, cerebellar | Diffuse hypomyelination |
POLR1C | AR | Early childhood | Pyramidal, extrapyramidal, cerebellar | Diffuse hypomyelination |
TUBB4A | AD | Infancy or childhood | Pyramidal cerebellar | Diffuse cerebral hypomyelination |
SLC17A5 | AR | Birth | Pyramidal extrapyramidal | Hypomyelination |
Source: GeneReviews — "NKX6-2-Related Disorder"
Physical exam for cryptorchidism in males |
Refer males w/cryptorchidism to urologist. |
Neurologic | Referral to pediatric neurologist | Assess for evidence of spasticity /or seizure activity. Miscellaneous/ |
Other | Consultation w/clinical geneticist or genetic counselor | Developmental assessment |
Treatment of Manifestations in Individuals with NKX6-2-Related Spastic Ataxia with Hypomyelination Manifestation/Concern | Treatment | Considerations/Other |
Eyes | Standard treatment per ophthalmology review | Community vision services through early intervention or school district |
Hearing | Hearing aids may be helpful; per otolaryngologist. | Community hearing services through early intervention or school district Congenital |
heart defect | Standard treatment per cardiologist | Respiratory |
insufficiency | Standard treatment per respiratory review; consider assisted ventilation as appropriate. | Airway pulmonary assessment for evidence of pulmonary function or poor secretion mgmt; Sleep study Dysphagia/ Inadequate |
nutrition | Nasogastric or gastrostomy tube may be required. | Maintain a low threshold for clinical feeding eval /or radiographic swallowing study if clinical signs /or symptoms of dysphagia. |
Cryptorchidism | Standard treatment per urologist | Spasticity |
Seizures | Anti-seizure medication | Typically difficult to control1 Family/ Community |