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Any spondylocostal dysostosis in which the cause of the disease is a mutation in the TBX6 gene.
Features include always present findings: Disproportionate short-trunk short stature, Sideways curvature of the spine (scoliosis), Hemivertebrae, and Vertebral fusion; and common findings: Missing ribs. 13 total HPO annotations.
Organ System | Phenotype Count | Example Features |
|---|---|---|
Bones and joints | 3 | Sideways curvature of the spine (scoliosis), Vertebral fusion, Butterfly vertebrae |
Growth and development | 2 | Severe short stature, Disproportionate short-trunk short stature |
Age of onset: at birth.
Spondylocostal dysostosis (SCDO), defined radiographically as multiple segmentation defects of the vertebrae that is usually generalized throughout the spine, is characterized clinically by a short trunk in proportion to height, short neck, and non-progressive mild scoliosis in most affected individuals. To date, nearly 100 individuals have been identified and/or reported with SCDO and biallelic pathogenic variants in one of the genes listed in . The following description of the phenotypic features associated with this condition is based on the cited reports. Skeletal. Multiple segmentation defects of the vertebrae, which is usually generalized throughout the spine, results in:
Source: GeneReviews — "Spondylocostal Dysostosis, Autosomal Recessive"
TBX6 function has not been fully characterized.
Spondylocostal dysostosis 5 is associated with mutations in the TBX6 gene on chromosome 16.
To date, penetrance appears to be complete for the pathogenic variants implicated in autosomal recessive SCDO.
Source: GeneReviews — "Spondylocostal Dysostosis, Autosomal Recessive"
Spondylocostal dysostosis (SCDO) should be suspected in individuals with the following radiographic features and family history:
Multiple segmentation defects of the vertebrae (M-SDV) most evident on anteroposterior radiograph of the whole spine. Abnormal segmentation of at least ten contiguous vertebrae. In the affected fetus or young child each vertebra is round or ovoid with smooth boundaries; the appearance of the vertebral column has been referred to as the "pebble beach" sign , especially in DLL3-related SCDO. As ossification proceeds after mid- to late childhood, the "pebble beach" appearance gives way to multiple irregularly shaped vertebral bodies and hemivertebrae that may be difficult to distinguish individually on plain x-ray.
Mild
scoliosis
Source: GeneReviews — "Spondylocostal Dysostosis, Autosomal Recessive"
Rarely, spondylocostal dysostosis (SCDO) occurs in association with chromosome abnormalities; however, apart from trisomy 8 mosaicism, no consistent genomic region has been involved, and the significance of these associations is unknown. Autosomal dominant SCDO. One family with autosomal dominant SCDO due to a heterozygous TBX6 pathogenic variant has been reported (OMIM 122600). Additional families with autosomal dominant SCDO without an identified gene have also been reported; in these families the extent of segmentation defects of the vertebrae is quite variable [, , , ]. Spondylothoracic dysostosis (STD), despite similarities to autosomal recessive SCDO, has distinctive phenotypic features that warrant this separate designation.
Source: GeneReviews — "Spondylocostal Dysostosis, Autosomal Recessive"
Genetic testing for TBX6 is available. Testing is considered confirmatory for diagnosis.
No approved treatments are currently available for spondylocostal dysostosis 5. The disease remains an area of unmet medical need.
No clinical practice guidelines for autosomal recessive spondylocostal dysostosis (SCDO) have been published. Evaluations Following Initial Diagnosis To establish the extent of disease and needs in an individual diagnosed with autosomal recessive SCDO, the evaluations summarized (if not performed as part of the evaluation that led to the diagnosis) are recommended. Table 3. Autosomal Recessive Spondylocostal Dysostosis: Recommended Evaluations Following Initial Diagnosis
System/Concern | Evaluation | Comment |
|---|---|---|
Skeletal | Full spine x-rays, AP lateral x-rays, chest x-rays | — |
Respiratory | Assessment of respiratory function per pulmonologist, esp if tachypnea /or feeding difficulties suggest possibility of respiratory insufficiency | Gastrointestinal |
Urinary tract | Ultrasound eval of kidneys urinary tract | In persons w/LFNG-related SCDO Neurologic |
Genetic counseling | By genetics professionals1 | To inform affected persons their families re nature, MOI, implications of AR SCDO to facilitate medical personal decision making Family support resources |
Autosomal Recessive Spondylocostal Dysostosis: Treatment of Manifestations Manifestation/Concern | Treatment |
Source: GeneReviews — "Spondylocostal Dysostosis, Autosomal Recessive"
View trials for spondylocostal dysostosis 5
To monitor existing manifestations, the individual's response to supportive care, and the emergence of new manifestations, the evaluations summarized in are recommended. Table 5. Autosomal Recessive Spondylocostal Dysostosis: Recommended Surveillance
System/Concern | Evaluation | Frequency |
|---|---|---|
Growth/Nutrition | Assess growth. | At each visit throughout childhood |
Skeletal | Assessment for spinal curvature | Annually or as needed Respiratory |
Neurologic | Assessment of neurologic motor function | Annually or as needed in those w/LFNG-related SCDO |
Development | Developmental assessment | Annually or as needed |
Gastrointestinal | The parents/care providers of young males need to be alert for signs of inguinal hernia its potential complications. | Annually or as needed SCDO = spondylocostal dysostosis |
Source: GeneReviews — "Spondylocostal Dysostosis, Autosomal Recessive"
Phenotype severity distribution: 4 always present features, 1 common feature.
No clinical trials have been registered for spondylocostal dysostosis 5.
103 publications have been identified in PubMed for spondylocostal dysostosis 5. Kisho has analyzed 20 by research type. Research spans Review / Meta-Analysis (40%), Case Report / Case Series (35%), and Epidemiology / Natural History (15%).
Research Type | Count | % of Total |
|---|---|---|
Research summaries | 8 | 40% |
Patient case studies | 7 | 35% |
Disease patterns and progression | 3 | 15% |
Laboratory research | 2 | 10% |
Varney S (2026). [PMID: 41751515](https://pubmed.ncbi.nlm.nih.gov/41751515/). *Genes (Basel)*. [Basic Science / Preclinical]
Rips J (2026). [PMID: 41014130](https://pubmed.ncbi.nlm.nih.gov/41014130/). *Am J Med Genet A*. [Case Report / Case Series]
Feng S (2026). [PMID: 41640696](https://pubmed.ncbi.nlm.nih.gov/41640696/). *J Clin Orthop Trauma*. [Review / Meta-Analysis]
Bhate M (2026). [PMID: 41001820](https://pubmed.ncbi.nlm.nih.gov/41001820/). *J Pediatr Ophthalmol Strabismus*. [Review / Meta-Analysis]
Peng Z (2025). [PMID: 40731016](https://pubmed.ncbi.nlm.nih.gov/40731016/). *Eur J Med Res*. [Review / Meta-Analysis]
Romo T 3rd (2025). [PMID: 38588716](https://pubmed.ncbi.nlm.nih.gov/38588716/). *Facial Plast Surg*. [Review / Meta-Analysis]
Nguyen HM (2025). [PMID: 40647586](https://pubmed.ncbi.nlm.nih.gov/40647586/). *Diagnostics (Basel)*. [Case Report / Case Series]
Wang L (2025). [PMID: 39854231](https://pubmed.ncbi.nlm.nih.gov/39854231/). *Proc Natl Acad Sci U S A*. [Basic Science / Preclinical]
Santangelo G (2025). [PMID: 40227331](https://pubmed.ncbi.nlm.nih.gov/40227331/). *Spine Deform*. [Epidemiology / Natural History]
Vanbelleghem E (2024). [PMID: 38997468](https://pubmed.ncbi.nlm.nih.gov/38997468/). *Eur J Hum Genet*. [Case Report / Case Series]
Data assembled from 6 of 12 sources · Last updated Sep 19, 2026, 1:11 PM UTC
Online Mendelian Inheritance in Man
Growth | No specific nutritional needs to be considered other than maintaining appropriate weight for height | Persons w/SCDO all have variable short-trunk short stature. |
Scoliosis | Surgical intervention as needed if scoliosis is significant; severe scoliosis is unusual. | External bracing (e.g., using vertical expandable prosthetic titanium rib)1 may be considered, as well as growing rods other devices as appropriate. Respiratory distress/failure |
Neurologic | Standard treatment of neurologic problems assoc w/LFNG-related SCDO according to findings symptoms | Inguinal hernia |
Autosomal Recessive Spondylocostal Dysostosis: Recommended Surveillance System/Concern | Evaluation | Frequency |
Growth/Nutrition | Assess growth. | At each visit throughout childhood |
Skeletal | Assessment for spinal curvature | Annually or as needed Respiratory |
Neurologic | Assessment of neurologic motor function | Annually or as needed in those w/LFNG-related SCDO |
Development | Developmental assessment | Annually or as needed |
Gastrointestinal | The parents/care providers of young males need to be alert for signs of inguinal hernia its potential complications. | Annually or as needed SCDO = spondylocostal dysostosis Evaluation of Relatives at Risk See for issues related to testing of at-risk relatives for genetic counseling purposes. Virtually all individuals with SCDO have relative truncal shortening, and some have generalized short stature. |