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Features include always present findings: Carpal bone hypoplasia, Narrow vertebral interpedicular distance, Patellar dislocation, and Knee dislocation and others; and rarely findings: Obesity. 24 total HPO annotations.
Organ System | Phenotype Count | Example Features |
|---|---|---|
Bones and joints | 8 | Carpal bone hypoplasia, Short femoral neck, Multiple joint dislocation |
Growth and development | 1 | Short stature |
Arms and legs | 1 | Tapered finger |
Age of onset: at birth.
EXOC6B-related spondyloepimetaphyseal dysplasia with joint laxity (EXOC6B-SEMD-JL) is characterized by multiple joint dislocations, joint laxity, short stature, scoliosis, kyphosis, and skeletal dysplasia (delayed carpal/tarsal bone ossification, leptodactyly, slender ribs, and vertebral anomalies). To date, seven individuals from five unrelated families have been identified with biallelic pathogenic variants in EXOC6B [; ; ; Authors, personal communication]. Most individuals have normal intellect, though developmental delay and hydrocephalus were noted in one individual . The following description of the phenotypic features associated with this condition is based on these reports. Table 2. EXOC6B-Related Spondyloepimetaphyseal Dysplasia with Joint Laxity: Frequency of Select Features
Feature | Proportion of Persons w/Feature | Comment |
|---|---|---|
Clinical manifestations | Joint dislocations | 7/7 |
Joint laxity | 7/7 | — |
Short stature1 | 5/7 | Postnatal onset |
EXOC6B encodes exocyst complex component 6B (811 aa). Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane Highest expression in Skin Not Sun Exposed Suprapubic (27.2 TPM) and Skin Sun Exposed Lower leg (26.0 TPM).
Spondyloepimetaphyseal dysplasia with joint laxity, type 3 is caused by mutations in the EXOC6B gene on chromosome 2.
EXOC6B is classified as a druggable target with score 0.0.
EXOC6B-related spondyloepimetaphyseal dysplasia with joint laxity (EXOC6B-SEMD-JL) should be suspected in probands with the following clinical, imaging, and family history findings.
Clinical findings
Congenital dislocations of the hips and knees; may also affect elbows, wrists, and/or ankles
Joint laxity affecting all joints and most evident at the wrists and fingers
Postnatal-onset short stature
Slender fingers (leptodactyly)
Genu valgum
Pes planus
Imaging findings
Source: GeneReviews — "EXOC6B-Related Spondyloepimetaphyseal Dysplasia with Joint Laxity"
Table 3. Common Conditions with Multiple Joint Problems (Laxity, Dislocations, Restriction of Joint Movement) in the Differential Diagnosis of EXOC6B-Related Spondyloepimetaphyseal Dysplasia with Joint Laxity
Gene | Disorder1 | MOI | Clinical Findings | Imaging Findings |
|---|---|---|---|---|
B3GALT6 | SEMD-JL (Beighton type), B3GALT6-related(OMIM 271640) | AR | Prenatal-onset short stature; Facial dysmorphism (oval face, prominent forehead, prominent eyes, blue sclera, micrognathia, cleft palate); Progressive kyphoscoliosis joint dislocation |
Genetic testing for EXOC6B is available. Testing is considered confirmatory for diagnosis.
No approved treatments are currently available for spondyloepimetaphyseal dysplasia with joint laxity, type 3. The disease remains an area of unmet medical need.
No clinical practice guidelines for EXOC6B-related spondyloepimetaphyseal dysplasia with joint laxity (EXOC6B-SEMD-JL) have been published. Evaluations Following Initial Diagnosis To establish the extent of disease and needs in an individual diagnosed with EXOC6B-SEMD-JL, the evaluations summarized (if not performed as part of the evaluation that led to the diagnosis) are recommended. Table 4. EXOC6B-Related Spondyloepimetaphyseal Dysplasia with Joint Laxity: Recommended Evaluations Following Initial Diagnosis
System/Concern | Evaluation | Comment |
|---|---|---|
Cardiovascular | Echocardiography | For routine cardiac eval |
Genetic counseling | By genetics professionals1 | To obtain a pedigree inform affected persons their families re nature, MOI, implications of EXOC6B-SEMD-JL to facilitate medical personal decision making Family support resources |
EXOC6B-Related Spondyloepimetaphyseal Dysplasia with Joint Laxity: Recommended Surveillance System/Concern | Evaluation | Frequency |
Joint manifestations | Assessment of joints by rheumatologist or orthopedic surgeon | Annually Scoliosis/Kyphosis |
Source: GeneReviews — "EXOC6B-Related Spondyloepimetaphyseal Dysplasia with Joint Laxity"
Activities with a high impact on joints that may increase the risk of dislocation should be avoided. Obesity should be avoided to reduce the negative impact on joints.
Source: GeneReviews — "EXOC6B-Related Spondyloepimetaphyseal Dysplasia with Joint Laxity"
View trials for spondyloepimetaphyseal dysplasia with joint laxity, type 3
To monitor existing manifestations, the individual's response to supportive care, and the emergence of new manifestations, the evaluations summarized in are recommended.
Table 6.
EXOC6B-Related Spondyloepimetaphyseal Dysplasia with Joint Laxity: Recommended Surveillance
System/Concern | Evaluation | Frequency
| Assessment of joints by rheumatologist or orthopedic surgeon | Annually
| Clinical radiographic assessment
Source: GeneReviews — "EXOC6B-Related Spondyloepimetaphyseal Dysplasia with Joint Laxity"
Phenotype severity distribution: 11 always present features.
Estimated prevalence: <1 in 1,000,000 (VERY_RARE).
No clinical trials have been registered for spondyloepimetaphyseal dysplasia with joint laxity, type 3.
5 publications have been identified in PubMed for spondyloepimetaphyseal dysplasia with joint laxity, type 3. Research spans Basic Science / Preclinical (50%), Case Report / Case Series (25%), and Epidemiology / Natural History (25%).
Chand K (2026). [PMID: 42068746](https://pubmed.ncbi.nlm.nih.gov/42068746/). *Biochem Biophys Res Commun*. [Basic Science / Preclinical]
Alqawlaq AK (2026). [PMID: 42231408](https://pubmed.ncbi.nlm.nih.gov/42231408/). *J Med Case Rep*. [Case Report / Case Series]
Jacob P (2025). [PMID: 39706863](https://pubmed.ncbi.nlm.nih.gov/39706863/). *European journal of human genetics : EJHG*. [Epidemiology / Natural History]
Upadhyai P (2025). [PMID: 40395934](https://pubmed.ncbi.nlm.nih.gov/40395934/). *Frontiers in cell and developmental biology*. [Basic Science / Preclinical]
Data assembled from 8 of 12 sources · Last updated Sep 20, 2026, 5:40 PM UTC
Online Mendelian Inheritance in Man
European rare disease database
Genetic and Rare Diseases Info Center
Slender fingers |
7/7 |
— |
Genu valgum | 6/7 | — |
Pes planus | 4/7 | — |
Spine manifestations | 6/7 | Scoliosis, kyphosis, short neck, /or hyperlordosis |
Barrel-shaped chest | 2/7 | — |
Radiographic findings | Delayed carpal bone ossifications | 7/7 |
Gracile, short tubular bones (leptodactyly) | 6/7 | — |
Metaphyseal dysplasia | 6/7 | — |
Epiphyseal dysplasia | 6/7 | — |
Slender ribs | 4/7 | — |
Irregular vertebral end plates | 3/7 | — |
Narrow interpedicular distance of lumbar vertebrae | 3/7 | — |
Platyspondyly | 2/7 | 1. Joint manifestations. All reported individuals have joint dislocations at birth; hip and knee joints are affected in all individuals. Other joints that are often dislocated include elbows, wrists, and ankles. The patella can also be dislocated. |
Source: GeneReviews — "EXOC6B-Related Spondyloepimetaphyseal Dysplasia with Joint Laxity"
Progressive kyphoscoliosis; Ovoid vertebral bodies; Severe platyspondyly; Short, flared iliac wings; Radioulnar dislocation
B3GAT3 | Multiple joint dislocations,short stature, craniofacial dysmorphisms, skeletal dysplasia ± heart defects, B3GAT3-related(OMIM 245600) | AR | Short stature; Brachycephaly, prominent forehead; Multiple joint dislocations; Cardiac anomalies | Scoliosis; Occasionally modest platyspondyly; Dislocation of radioulnar interphalangeal joints; Broad ilia; Long phalanges w/relatively short metacarpals; Occasionally generalized osteoporosis |
B4GALT7 | Ehlers-Danlos syndrome, spondylodysplastic type 1 (EDSSPD1), B4GALT7-related(OMIM 130070) | AR | Short stature; Broad, flat forehead; Joint laxity dislocations; Long, slender fingers toes; Loose elastic skin | Scoliosis; Large joint dislocation; Radioulnar synostosis |
CANT1 | Desbuquois dysplasia,CANT1-related(OMIM 251450) | AR | Prenatal-onset short stature; Midface hypoplasia; Joint dislocations | Occasionally, multiple coronal clefts of vertebral bodies; Advanced carpal ossification; Monkey wrench femora; Hyperphalangy of index finger |
CHST3 | Chondrodysplasia w/congenital joint dislocations,CHST3-related(See CHST3-Related Skeletal Dysplasia.) | AR | Short stature; Joint dislocations /or restriction of joint movement; Clubfeet; Kyphoscoliosis | Multiple coronal clefts of vertebral bodies; Increase in interpedicular distance from T12 to L1 or L2; Bifid distal humerus; Accessory carpal ossification centers |
GZF1 | Joint laxity, short stature, myopia (OMIM 617662) | AR | Short stature; Severe myopia; Joint dislocation laxity | Osteopenia; Progressive kyphoscoliosis |
KIF22 | SEMD-JL (Hall type or leptodactylic type),KIF22-related(OMIM 603546) | AD | Short stature; Knee/hip joint dislocation; Midface hypoplasia; Joint laxity; Genu valgum; Velvety skin; Hypotonia | Progressive scoliosis; Vertebral dysplasia (modest platyspondyly in younger persons); Epimetaphyseal dysplasia (small, flat epiphyses irregular metaphyses w/longitudinal striations); Gracile, short tubular bones |
NIN | SEMD-JL (leptodactyly-like phenotype)2 | AR | Microcephaly; Primordial short stature; Flat facial features; Joint laxity; Joint dislocation; Genu valgum; Pes cavus | Scoliosis; Squared ve... |
Source: GeneReviews — "EXOC6B-Related Spondyloepimetaphyseal Dysplasia with Joint Laxity"