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Branchiootic syndrome is a rare, genetic multiple congenital anomalies syndrome characterized by second branchial arch anomalies (branchial cysts and fistulae), malformations of the outer, middle and inner ear associated with sensorineural, mixed or conductive hearing loss, and the absence of renal abnormalities. Typical ear findings consist of malformed auricles (e.g. lop or cupped ears), preauricular pits and/or tags, and middle and/or inner ear dysplasias (including cochlear, vestibular and semicircular channel hypoplasia, malformation of the ossicles and of middle ear space).
Features include very common findings: Preauricular pit and Hearing loss (hearing impairment); and common findings: Abnormality of the outer ear, Abnormality of the inner ear, Conductive hearing impairment, and Inner ear hearing loss (sensorineural hearing impairment) and others. 16 total HPO annotations.
Organ System | Phenotype Count | Example Features |
|---|---|---|
Head and neck | 4 | Facial asymmetry, Facial palsy, Cleft palate |
The clinical diagnostic criteria for branchiootorenal spectrum disorder (BORSD) outlined by remain clinically useful and supported by subsequent studies .
Branchiootorenal spectrum disorder (BORSD) should be suspected in probands with the following major and minor diagnostic criteria and family history.
Major diagnostic criteria
• Second branchial arch anomalies
Source: GeneReviews —
No approved treatments are currently available for branchiootic syndrome. The disease remains an area of unmet medical need.
No consensus clinical practice guidelines for branchiootorenal spectrum disorder (BORSD) have been published. The following recommendations are based on the authors' personal experience managing individuals with BORSD.
To establish the extent of disease and needs in an individual diagnosed with BORSD, the evaluations summarized (if not performed as part of the evaluation that led to the diagnosis) are recommended.
To monitor existing manifestations, the individual's response to supportive care, and the emergence of new manifestations, the evaluations in are recommended.
Table 5.
Branchiootorenal Spectrum Disorder: Recommended Surveillance
System/Concern | Evaluation | Frequency
| Serial audiometry to survey for progression of hearing loss based on symptoms reported by affected person | At each visit
No clinical trials have been registered for branchiootic syndrome.
5 publications have been identified in PubMed for branchiootic syndrome. Research spans Epidemiology / Natural History (50%), Case Report / Case Series (25%), and Basic Science / Preclinical (25%).
Li G (2025). [PMID: 40682672](https://pubmed.ncbi.nlm.nih.gov/40682672/). *Cell Mol Life Sci*. [Case Report / Case Series]
Daga A (2024). [PMID: 39574791](https://pubmed.ncbi.nlm.nih.gov/39574791/). *Kidney Med*. [Epidemiology / Natural History]
Cho SH (2024). [PMID: 39125727](https://pubmed.ncbi.nlm.nih.gov/39125727/). *Int J Mol Sci*. [Basic Science / Preclinical]
Duran LG (2024). [PMID: 39352850](https://pubmed.ncbi.nlm.nih.gov/39352850/). *Rev Fac Cien Med Univ Nac Cordoba*. [Epidemiology / Natural History]
Data assembled from 5 of 12 sources · Last updated Sep 19, 2026, 2:53 PM UTC
European rare disease database
Genetic and Rare Diseases Info Center
Ears | 3 | Conductive hearing impairment, Inner ear hearing loss (sensorineural hearing impairment), Hearing loss (hearing impairment) |
Skin | 1 | Preauricular skin tag |
Branchiootorenal spectrum disorder (BORSD) is characterized by second branchial arch anomalies (e.g., preauricular pits and branchial cleft sinuses or cysts) and malformations of the outer, middle, and inner ear associated with conductive, sensorineural, and/or mixed hearing impairment. Congenital anomalies of the kidney and urinary tract (CAKUT) include kidney agenesis, hypoplasia, and dysplasia as well as urinary tract anomalies such as ureteropelvic junction (UPJ) obstruction, calyceal cysts and/or diverticula, and/or vesicoureteral reflux (VUR). Glomerular pathology that includes proteinuria and glomerulosclerosis has been reported. Some individuals progress to end-stage kidney disease (ESKD) depending on the severity of the kidney involvement.
Source: GeneReviews — "Branchiootorenal Spectrum Disorder"
At the time of this writing, Online Mendelian Inheritance in Man (OMIM) lists more than 700 entries for syndromic forms of hearing loss. Although branchiootorenal spectrum disorder (BORSD) has a distinctive phenotype that is readily appreciated when segregating in large families, the diagnosis can be difficult to establish in small families. Possible considerations in a differential diagnosis are shown in .
Table 2.
Genes of Interest in the Differential Diagnosis of Branchiootorenal Spectrum Disorder
Gene(s) | Disorder | MOI | Features of Disorder
Overlapping w/BORSD | Distinguishing from BORSD
CHD7 | CHD7 disorder (incl CHARGE syndrome) | AD | Hearing loss, external/middle/inner ear anomalies, kidney anomalies | Coloboma, choanal atresia, genital hypoplasia, developmental delay
COL4A3
COL4A4
Source: GeneReviews — "Branchiootorenal Spectrum Disorder"
Table 3.
Branchiootorenal Spectrum Disorder: Recommended Evaluations Following Initial Diagnosis
System/Concern | Evaluation | Comment
| Otoscopic exam to assess external auditory canal tympanic membrane | For anomalies such as atresia or stenosis
| Physical exam of neck for sinus tracts, cysts, /or fistulae | • Consider imaging study (CT or MRI) of neck if a mass is palpable under sternocleidomastoid muscle.
It may be helpful to obtain a fistulogram by using a contrast agent to visualize the path of the tract connecting the skin on the neck to the tonsillar fossa.
| Complete assessment of auditory acuity using ABR testing, OAE testing, pure-tone audiometry1 | If hearing impairment fluctuates or is progressive, perform temporal bone imaging using CT /or MRI of temporal bones to determine if vestibular aqueduct is enlarged.2
| • Kidney ultrasound exam to detect agenesis, hypoplasia, dysplasia
Source: GeneReviews — "Branchiootorenal Spectrum Disorder"
Hearing loss. Individuals with hearing loss should avoid environmental exposures known to cause hearing loss. Most important for persons with mild-to-moderate hearing loss is avoidance of repeated overexposure to loud noises, particularly secondary to earbud use. The headphone safety feature built into most smartphones can be set to a maximum limit of 75 decibels (dB). Headphone/earbud safety features can be found in the phone settings menu:
In iPhones, under Settings Sounds Haptics Headphone Safety
In Android phones, under Settings Sounds Vibrations Volume Media volume limit
Also see these general resources on noise reduction:
• 6 Simple Ways to Check If Your Headphones Are Too Loud
• How Do I Prevent Hearing Loss from Loud Noise?
Anecdotal reports that increased intracranial pressure in individuals with enlarged vestibular aqueduct (EVA) can occasionally trigger a decline in hearing has led some providers to recommend avoiding activities such as weightlifting and contact sports ; however, evidence is insufficient to support the claim that avoiding these activities will decrease the risk of overall hearing loss progression .
Source: GeneReviews — "Branchiootorenal Spectrum Disorder"
Search ClinicalTrials.gov in the US and EU Clinical Trials Register in Europe for information on clinical studies for a wide range of diseases and conditions. Note: There may not be clinical trials for this disorder.
Source: GeneReviews — "Branchiootorenal Spectrum Disorder"
View trials for branchiootic syndrome
Exam by physician familiar w/BORSD | • Annually
More frequently if fluctuation or progression of hearing loss is described by affected person
| Eval of kidney function | Annually1
BORSD = branchiootorenal spectrum disorder
1. For individuals with CAKUT, it is recommended that kidney function be evaluated at least annually, especially if the CAKUT involves unilateral kidney dysplasia. Follow up as recommended by a pediatric nephologist is essential for detecting potential complications and for monitoring the long-term effects of kidney abnormalities.
Source: GeneReviews — "Branchiootorenal Spectrum Disorder"
Phenotype severity distribution: 2 very common features, 7 common features.