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17q12 microdeletion syndrome is a rare chromosomal anomaly syndrome resulting from the partial deletion of the long arm of chromosome 17 characterized by renal cystic disease, maturity onset diabetes of the young type 5, and neurodevelopmental disorders, such as cognitive impairment, developmental delay (particularly of speech), autistic traits and autism spectrum disorder. Mullerian aplasia in females, macrocephaly, mild facial dysmorphism (high forehead, deep set eyes and chubby cheeks) and transcient hypercalcaemia have also been reported.
Features include sometimes findings: Epicanthus, Short foot, Short stature, and Seizure and others. 54 total HPO annotations.
Organ System | Phenotype Count | Example Features |
|---|---|---|
Kidneys and urinary system | 7 | Unilateral renal agenesis, Renal hypoplasia, Hyperechogenic kidneys |
No consensus clinical diagnostic criteria for 17q12 recurrent deletion syndrome have been published.
17q12 recurrent deletion syndrome should be suspected in individuals with any of the following clinical, laboratory, and family history findings.
Clinical findings
• Kidney abnormalities
Source: GeneReviews — "17q12 Recurrent Deletion Syndrome"
No approved treatments are currently available for chromosome 17q12 deletion syndrome. The disease remains an area of unmet medical need.
No clinical practice guidelines for 17q12 recurrent deletion syndrome have been published. In the absence of published guidelines, the following recommendations are based on the authors' personal experience managing individuals with this disorder.
To establish the extent of disease and needs in an individual diagnosed with 17q12 recurrent deletion syndrome, the evaluations summarized (if not performed as part of the evaluation that led to the diagnosis) are recommended.
To monitor existing manifestations, the individual's response to supportive care, and the emergence of new manifestations, the evaluations summarized in are recommended.
Table 6.
17q12 Recurrent Deletion Syndrome: Recommended Surveillance
System/Concern | Evaluation | Frequency
1 clinical trial registered, 1 recruiting. Interventions under study include other interventions. Research is primarily sponsored by academic and government institutions.
24 publications have been identified in PubMed for chromosome 17q12 deletion syndrome. Research spans Case Report / Case Series (67%), Basic Science / Preclinical (17%), and Other (4%).
Research Type | Count | % of Total |
|---|---|---|
Patient case studies | 16 | 67% |
Data assembled from 7 of 12 sources · Last updated Sep 18, 2026, 7:38 PM UTC
Patient Advocacy Groups (PAGs) provide support, resources, and community for patients and caregivers.
Online Mendelian Inheritance in Man
European rare disease database
Genetic and Rare Diseases Info Center
5 |
Seizure, Focal impaired awareness seizure, Intellectual disability |
Arms and legs | 4 | Short foot, Long fingers, Upper limb undergrowth |
Head and neck | 4 | Abnormal upper lip morphology, Facial asymmetry, High palate |
Skin | 4 | Nail dystrophy, Small nail, Hyperconvex nail |
Growth and development | 1 | Short stature |
Blood and immune system | 1 | Recurrent urinary tract infections |
Digestive system | 1 | Elevated circulating hepatic transaminase concentration |
Lab test results | 1 | Elevated circulating hepatic transaminase concentration |
Bones and joints | 1 | Sideways curvature of the spine (scoliosis) |
Ears | 1 | Bilateral sensorineural hearing impairment |
Eyes | 1 | Horizontal nystagmus |
Age of onset: at birth.
17q12 recurrent deletion syndrome is characterized by variable combinations of the following three most common findings: kidney abnormalities – including congenital abnormalities of the kidney and urinary tract (CAKUT) and tubulointerstitial disease – maturity-onset diabetes of the young (MODY), and neurodevelopmental/neuropsychiatric disorders (e.g., developmental delay, intellectual disability, autism spectrum disorder [ASD], attention-deficit/hyperactivity disorder [ADHD], schizophrenia, anxiety, and bipolar disorder). In families with more than one affected individual, significant intrafamilial variability has been reported.
Source: GeneReviews — "17q12 Recurrent Deletion Syndrome"
Kidney structural or functional defects. See .
Table 3.
Genetic Disorders with Kidney Structural or Functional Defects in the Differential Diagnosis of 17q12 Recurrent Deletion Syndrome
Gene(s) | Disorder | MOI | Kidney-Related Phenotype | Other Features
20 genes incl:CEP290INVSIQCB1NPHP1NPHP3NPHP4TMEM67 | Nephronophthisis-related ciliopathies | AR(typically) | • Polyuria polydipsia resulting from urine-concentrating ability
Chronic tubulointerstitial nephritis
Progression to ESKD
Note: NPH is suspected in absence of CAKUT signs/symptoms of glomerular kidney disease.
| • Chronic anemia resistant to therapy
Source: GeneReviews — "17q12 Recurrent Deletion Syndrome"
Table 4.
17q12 Recurrent Deletion Syndrome: Recommended Evaluations Following Initial Diagnosis
System/Concern | Evaluation | Comment
| • Blood pressure
Kidney bladder ultrasound
Serum BUN, creatinine, electrolytes (incl calcium, Mg, phosphorus) uric acid
Urine protein, Mg, creatinine
Consultation w/nephrologist
| • Random urine Mg/creatinine is needed to calculate fractional excretion of Mg.
FEMg (2%) is diagnostic of tubular Mg wasting in those w/normal kidney function.
| • Assessment of speech language
Cognitive, motor, social development
Perceptual anomalies
Mood
Behavior
|
| • Fasting glucose hemoglobin A1c levels
Consultation w/endocrinologist
|
| • Males: clinical exam
Females: pelvic ultrasound gynecologic exam to evaluate for possible mllerian abnormalities
|
| Liver function tests (hepatic function panel, GGT), lipid panel |
| • ...
Source: GeneReviews — "17q12 Recurrent Deletion Syndrome"
Individuals with HNF1B-associated kidney disease (including the 17q12 recurrent deletion) who develop end-stage kidney disease (ESKD) and require kidney transplantation are at increased risk for developing post-transplant diabetes mellitus; therefore, use of an immunosuppressive regimen that avoids tacrolimus and mammalian target of rapamycin (mTOR) inhibitors and reduces corticosteroid exposure may be beneficial, including for those who do not have preexisting diabetes . Nephrotoxic drugs (e.g., nonsteroidal anti-inflammatory drugs) should be avoided by those with kidney abnormalities. Hepatotoxic medications and alcohol should be avoided by those with liver abnormalities. For individuals with mental health conditions such as autism spectrum disorder, schizophrenia, or bipolar disorder, the authors recommend caution when considering the use of antipsychotic agents that may lead to weight gain and increased risk of metabolic syndrome and diabetes mellitus, since individuals with 17q12 deletions are already at increased risk for diabetes mellitus. Likewise, the use of mood stabilizers that can affect kidney function in the long term, such as lithium, should be carefully considered in the setting of potential underlying anatomic and functional abnormalities in individuals with 17q12 deletions.
Source: GeneReviews — "17q12 Recurrent Deletion Syndrome"
Search ClinicalTrials.gov in the US and EU Clinical Trials Register in Europe for access to information on clinical studies for a wide range of diseases and conditions. Note: There may not be clinical trials for this disorder.
Source: GeneReviews — "17q12 Recurrent Deletion Syndrome"
1 trial found
If an abnormality is detected, more frequent ultrasound may be warranted.
Monitor:
Blood pressure
Kidney function
Serum concentration of Mg, potassium, uric acid
Urine Mg creatinine
Urine protein-to-creatinine ratio
| • Periodic, preferably under guidance of nephrologist
Annual or more frequent monitoring may be advised for those who: (1) have lab findings suggestive of kidney disease; (2) are taking potentially nephrotoxic medications (e.g., NSAIDs); (3) have genitourinary structural abnormalities.1
| Assess developmental progress educational needs. | At each visit throughout childhood adolescence
Assess for features of ASD ADHD. | At each visit in early childhood
Full psychoeducational eval incl assessment of speech, cognitive, social/emotional, adaptive, motor skills | In children who experience difficulty w/school or behavioral challenges
Assess for prodromal psychotic symptoms bipolar disorder.
Source: GeneReviews — "17q12 Recurrent Deletion Syndrome"
Estimated prevalence: <1 in 1,000,000 (VERY_RARE).
Laboratory research |
4 |
17% |
Other research | 1 | 4% |
Research summaries | 1 | 4% |
Clinical study results | 1 | 4% |
Disease patterns and progression | 1 | 4% |
Yang Y (2026). [PMID: 41924323](https://pubmed.ncbi.nlm.nih.gov/41924323/). *Clin Nephrol Case Stud*. [Case Report / Case Series]
Bekiesinska-Figatowska M (2026). [PMID: 40839116](https://pubmed.ncbi.nlm.nih.gov/40839116/). *Pediatric nephrology (Berlin, Germany)*. [Case Report / Case Series]
Özdemir Atikel Y (2025). [PMID: 41636192](https://pubmed.ncbi.nlm.nih.gov/41636192/). *The Turkish journal of pediatrics*. [Case Report / Case Series]
Fontana P (2025). [PMID: 41009948](https://pubmed.ncbi.nlm.nih.gov/41009948/). *Genes*. [Case Report / Case Series]
Lyu Y (2025). [PMID: 40983223](https://pubmed.ncbi.nlm.nih.gov/40983223/). *Gene*. [Basic Science / Preclinical]
Ceravolo G (2025). [PMID: 41465172](https://pubmed.ncbi.nlm.nih.gov/41465172/). *Genes*. [Case Report / Case Series]
Rico-Rodríguez M (2025). [PMID: 40901483](https://pubmed.ncbi.nlm.nih.gov/40901483/). *Medicine international*. [Case Report / Case Series]
Qiu X (2025). [PMID: 39826477](https://pubmed.ncbi.nlm.nih.gov/39826477/). *ESMO open*. [Basic Science / Preclinical]
Yuan X (2025). [PMID: 40542325](https://pubmed.ncbi.nlm.nih.gov/40542325/). *Indian journal of pediatrics*. [Case Report / Case Series]
Tian W (2025). [PMID: 40315683](https://pubmed.ncbi.nlm.nih.gov/40315683/). *European journal of obstetrics, gynecology, and reproductive biology*. [Case Report / Case Series]