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Features include always present findings: Decreased circulating complement factor I concentration; and common findings: Recurrent meningitis, Decreased circulating complement C3 concentration, Septic arthritis, and Recurrent meningococcal disease and others. 17 total HPO annotations.
Data assembled from 7 of 12 sources · Last updated Sep 19, 2026, 9:37 PM UTC
Online Mendelian Inheritance in Man
European rare disease database
Genetic and Rare Diseases Info Center
Common questions about complement factor I deficiency
Organ System | Phenotype Count | Example Features |
|---|---|---|
Blood and immune system | 5 | Recurrent urinary tract infections, Recurrent streptococcus pneumoniae infections, Recurrent Haemophilus influenzae infections |
Kidneys and urinary system | 3 | Glomerulonephritis, Recurrent urinary tract infections, Reduced kidney function (renal insufficiency) |
Brain and nerves | 1 | Recurrent meningitis |
Lungs and breathing | 1 | Recurrent streptococcus pneumoniae infections |
Skin | 1 | Recurrent skin infections |
Bones and joints | 1 | Septic arthritis |
Ears | 1 | Recurrent otitis media |
Age of onset. C3 glomerulopathy (C3G) affects individuals of all ages. report a 1:1 female:male distribution and a median age at diagnosis of 23 years. In comparing the two major subtypes, the median age at time of diagnosis in C3 glomerulonephritis (C3GN) is higher than in dense deposit disease (DDD). In childhood, DDD is more frequently diagnosed than C3GN . Renal disease. Individuals with C3G typically present with one of the following findings:
Hematuria
Proteinuria
Hematuria and proteinuria
Acute nephritic syndrome
Nephrotic syndrome
Hypocomplementemia. Individuals with C3G have low levels of complement component C3. Complement dysregulation can be mediated by autoantibodies . Autoantibodies that may be detected in individuals with C3G:
Source: GeneReviews — "C3 Glomerulopathy"
CFI encodes complement factor I (583 aa). Trypsin-like serine protease that plays an essential role in regulating the immune response by controlling all complement pathways. Highest expression in Liver (256.4 TPM) and Kidney Cortex (93.2 TPM).
Complement factor I deficiency is associated with mutations in the CFI gene on chromosome 4.
CFI is classified as a druggable target (Druggable Genome, Enzyme, and Protease categories) with score 5.0.
To date, the most striking genotype-phenotype correlation has been with CFHR fusion genes and the C3GN phenotype (as opposed to the DDD phenotype) .
Source: GeneReviews — "C3 Glomerulopathy"
C3 glomerulopathy (C3G) is a complex ultra-rare complement-mediated renal disease caused by uncontrolled activation of the complement alternative pathway (AP) in the fluid phase (as opposed to cell surface); it is rarely inherited in a simple mendelian fashion.
C3G should be suspected in individuals of all ages who present with one of the following:
Hematuria
Proteinuria
Hematuria and proteinuria
Acute nephritic syndrome
Nephrotic syndrome
Persistent hypocomplementemia (low serum levels of complement component C3)
The diagnosis of C3G is established in a proband with typical findings on renal biopsy. Some individuals will have biallelic or heterozygous pathogenic variants identified by molecular genetic testing in one or more of the genes listed in...
Source: GeneReviews — "C3 Glomerulopathy"
Table 3. Disorders to Consider in the Differential Diagnosis of C3G
Disorder | Gene(s) | MOI | Clinical Features of This Disorder |
|---|---|---|---|
Overlapping w/C3G | Distinguishing from C3G Post-infectious glomerulonephritis1 | NA | Acquired |
Immune-complex MPGN2 | NA | Acquired |
Genetic testing for CFI is available. Testing is considered confirmatory for diagnosis.
Biomarker and diagnostic research for complement factor I deficiency has been reported in the published literature.
No approved treatments are currently available for complement factor I deficiency. The disease remains an area of unmet medical need.
To establish the extent of disease and needs in an individual diagnosed with C3G, the following evaluations are recommended if they have not already been completed:
Evaluate the complement system by measuring serum/plasma concentrations of C3, C3c, C3d, C4, C5, fB, Ba, Bb, fH, fI, properdin, and s(C5b-9).
Quantitate the degree of complement function by measuring CH50 and APH50.
Measure autoantibodies including C3NeFs, C4NeFs, C5NeFs, FHAA, and FBAA.
Establish the extent of renal disease by measuring serum creatinine concentration, and monitor creatinine clearance, proteinuria, and hematuria.
Quantitate the degree of chronic renal damage by renal biopsy.
Obtain a baseline ophthalmologic examination.
Consult with a clinical geneticist and/or genetic counselor.
Currently, there are no therapeutic agents specifically designed to target the underlying complement dysregulation that occurs in individuals with C3G. Nonspecific therapies are most commonly used. Nonspecific therapies have been shown to be effective in numerous chronic glomerular diseases. The judicious use of these agents along with optimal blood pressure control is of benefit in individuals with C3G.
Source: GeneReviews — "C3 Glomerulopathy"
Numerous anti-complement therapies are entering clinical trials for individuals with C3G. These trials are registered under ClinicalTrials.gov. Search ClinicalTrials.gov in the US and EU Clinical Trials Register in Europe for access to information on clinical studies for a wide range of diseases and conditions.
Source: GeneReviews — "C3 Glomerulopathy"
View trials for complement factor I deficiency
The following are appropriate:
Close monitoring of renal function by a nephrologist with familiarity with the C3G disease spectrum
Note: Frequency of follow up and testing required is determined by the degree of renal dysfunction.
Complete biannual assessment of the complement pathway
Periodic eye examinations to evaluate the fundus
Source: GeneReviews — "C3 Glomerulopathy"
Phenotype severity distribution: 1 always present feature, 7 common features.
Estimated prevalence: <1 in 1,000,000 (VERY_RARE).
No clinical trials have been registered for complement factor I deficiency.
139 publications have been identified in PubMed for complement factor I deficiency. Research spans Basic Science / Preclinical (59%), Epidemiology / Natural History (15%), and Case Report / Case Series (10%).
Research Type | Count | % of Total |
|---|---|---|
Laboratory research | 82 | 59% |
Disease patterns and progression | 21 | 15% |
Patient case studies | 14 | 10% |
Research summaries | 10 | 7% |
Clinical study results | 6 | 4% |
New treatment approaches | 4 | 3% |
Testing and diagnosis research | 2 | 1% |
Horváth HR (2026). [PMID: 41832580](https://pubmed.ncbi.nlm.nih.gov/41832580/). *Orphanet J Rare Dis*. [Review / Meta-Analysis]
Qiu A (2026). [PMID: 41701548](https://pubmed.ncbi.nlm.nih.gov/41701548/). *Kidney360*. [Basic Science / Preclinical]
Wu B (2026). [PMID: 41272252](https://pubmed.ncbi.nlm.nih.gov/41272252/). *J Fluoresc*. [Diagnostic / Biomarker]
Li X (2026). [PMID: 42060028](https://pubmed.ncbi.nlm.nih.gov/42060028/). *Mol Biomed*. [Basic Science / Preclinical]
Ratanaphisit T (2026). [PMID: 42141164](https://pubmed.ncbi.nlm.nih.gov/42141164/). *Eur J Pediatr*. [Epidemiology / Natural History]
Byrd AU (2026). [PMID: 42135031](https://pubmed.ncbi.nlm.nih.gov/42135031/). *J Leukoc Biol*. [Epidemiology / Natural History]
Baidya A (2026). [PMID: 42186029](https://pubmed.ncbi.nlm.nih.gov/42186029/). *J Biomed Sci*. [Basic Science / Preclinical]
Zhu D (2026). [PMID: 41067657](https://pubmed.ncbi.nlm.nih.gov/41067657/). *Brain, behavior, and immunity*. [Basic Science / Preclinical]
Selvan ME (2026). [PMID: 42064918](https://pubmed.ncbi.nlm.nih.gov/42064918/). *medRxiv*. [Epidemiology / Natural History]
Gong N (2026). [PMID: 41963283](https://pubmed.ncbi.nlm.nih.gov/41963283/). *Cell Death Dis*. [Basic Science / Preclinical]
Juvenile acute non-proliferative glomerulonephritis3 | NA | Acquired | Mesangial cell proliferation, subepithelial deposits on EM |
LCAT | AR | ESRD, glomerular pattern of IF similar to dense deposit disease | Abnl lipoprotein (lipoprotein X); corneal opacities; normochromic anemia; capillary endothelial damage; cross-striated vacuole structures |
Partial lipodystrophy5 | Several genes | AD/AR | Loss of subcutaneous fat in upper half of the body |
Age-related macular degeneration6 | Many genes | AD | Drusen |
EFEMP1 | AD | Drusen | No renal disease abnl = abnormal; AD = autosomal dominant; AR = autosomal recessive; EM = electron microscopy; IF = immunofluorescence; MOI = mode of inheritance; MPGN = membranoproliferative glomerulonephritis; nl = normal 1. , , , 2. , , 3. , 4. , 5. , , , , 6. , , , 7. , , , , |
Source: GeneReviews — "C3 Glomerulopathy"