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An autosomal dominant hereditary neoplastic syndrome caused by pathogenic variants in the MSH6 mismatch repair gene. It is characterized by an increased risk of colorectal cancer in the absence of extensive polyposis, endometrial, ovarian, gastric, small intestinal, and urinary tract cancers, often occuring at younger ages.
Data assembled from 6 of 12 sources · Last updated Sep 19, 2026, 1:55 PM UTC
Online Mendelian Inheritance in Man
Genetic and Rare Diseases Info Center
Common questions about Lynch syndrome 5
Features include: Neoplasm of the pancreas, Hereditary nonpolyposis colorectal carcinoma, Ovarian neoplasm, and Endometrial carcinoma.
Individuals with Lynch syndrome are at increased risk for colorectal cancer (CRC) and other cancers including those of the endometrium, ovary, stomach, small bowel, urinary tract, biliary tract, brain (usually glioblastoma), skin (sebaceous adenomas, sebaceous carcinomas, and keratoacanthomas), pancreas, and prostate. Table 3. Cancer Risks by Gene in Individuals with Lynch Syndrome by Age 70 Years Compared to the General Population
CancerLocation | GeneralPopulationRisk by Age 741 | Cancer Risk by Age 702,3 |
|---|---|---|
EPCAM F | M | F |
Any | 20% | 78% |
Colorectum | 2%4 | 44% |
Endometrium | 1%4 | 35% |
13% | 12%5 Ovary | 0.7% |
3% | Stomach | 1% |
Small bowel | 1% Ureter, kidney | 1% |
Urinary bladder | 1% | 3% |
Prostate | 4% | 7% |
16% | 5% | 5% |
Brain | 1% | 2% |
Breast | 5%4 | 11% |
Source: GeneReviews — "Lynch Syndrome"
MSH6 encodes mutS homolog 6 (1,360 aa). Component of the post-replicative DNA mismatch repair system (MMR). Heterodimerizes with MSH2 to form MutS alpha, which binds to DNA mismatches thereby initiating DNA repair. Highest expression in Ovary (40.1 TPM) and Testis (29.0 TPM).
Lynch syndrome 5 is associated with mutations in the MSH6 gene on chromosome 2.
The MSH6 protein participates in Defective Mismatch Repair Associated With MSH6, Mismatch repair (MMR) directed by MSH2:MSH6 (MutSalpha), and Mismatch repair (MMR) directed by MSH2:MSH3 (MutSbeta) pathways.
MSH6 is classified as a druggable target (Clinically Actionable and Dna Repair categories) with score 6.5.
EPCAM. The risk for extracolonic cancers is dependent on the size of the deletion. 3' EPCAM deletions have been shown to confer a lower risk for extracolonic cancers, whereas deletions that extend into MSH2 confer extracolonic cancer risks similar to intragenic MSH2 pathogenic variants .
Source: GeneReviews — "Lynch Syndrome"
Penetrance of CRCs and extracolonic cancers associated with pathogenic variants in an MMR gene or EPCAM is less than 100% . Therefore, some individuals with a cancer-predisposing pathogenic variant in an MMR gene or EPCAM may never develop cancer.
Source: GeneReviews — "Lynch Syndrome"
No consensus clinical diagnostic criteria for Lynch syndrome have been published.
A diagnosis of Lynch syndrome should be suspected in a proband with:
A diagnosis of a tumor of the Lynch syndrome spectrum (e.g., colorectal, endometrial, ovarian, stomach, small bowel, urinary tract [urothelial], biliary tract, prostate, brain [usually glioblastoma], skin [sebaceous adenomas, sebaceous carcinomas, and keratoacanthomas], and pancreas) with one of the following on tumor tissue
testing:
Source: GeneReviews — "Lynch Syndrome"
Hereditary Cancer Syndromes Table 4. Hereditary Cancer Syndromes with Increased Risk of Colorectal Cancer in the Differential Diagnosis of Lynch Syndrome
Gene(s) | Disorder | MOI | Polyps | Colorectal Cancer | Other Associated Cancers / Clinical Manifestations |
|---|---|---|---|---|---|
RPS20 | RPS20-assoc hereditary nonpolyposis CRC1 | AD | No |
Genetic testing for MSH6 is available. Testing is considered confirmatory for diagnosis.
Biomarker and diagnostic research for Lynch syndrome 5 has been reported in the published literature.
No approved treatments are currently available for Lynch syndrome 5. The disease remains an area of unmet medical need.
To establish the extent of disease and needs in an individual diagnosed with Lynch syndrome, the evaluations summarized in are recommended.
Table 6.
Recommended Evaluations Following Initial Diagnosis in Individuals with Lynch Syndrome
System/Concern | Evaluation | Comment
| Colonoscopy w/removal of precancerous polyps1 | Beginning between ages 20 25 yrs or 2-5 yrs before earliest CRC diagnosis in family, whichever is earlier
| Educate females re symptoms of endometrial cancers (e.g., abnormal uterine bleeding, postmenopausal bleeding). | Eval of symptoms should incl endometrial biopsy every 1-2 yrs2
Screening by endometrial biopsy2 | Beginning between ages 30 35 yrs
| Educate females re symptoms assoc w/ovarian cancer (e.g., pelvic or abdominal pain, bloating, abdominal girth, difficulty eating, early satiety, urinary frequency or urgency). | Symptoms that persist for several wks are a change from baseline should prompt eval by physician.
Gastric duodenal
cancers | • Consider upper endoscopy exam esp for those w/family history of gastric cancer those of Asian ancestry.
Biopsies should be evaluated for H pylori infections so that appropriate treatment can be given as needed.3
| Beginning at age 40 yrs
| Consider capsule endoscopy small bowel enterography. | In symptomatic persons
Urinary tract cancers
(renal pelvis, ureter,
Source: GeneReviews — "Lynch Syndrome"
There is accumulating evidence that a high body mass, cigarette smoking, type 2 diabetes, and high cholesterol increase the risk of CRC in Lynch syndrome. The direction and strength of observed associations are similar to those for the general population .
Source: GeneReviews — "Lynch Syndrome"
Chromoendoscopy vs narrow band imaging (NBI) vs high-definition white-light colonoscopy for Lynch syndrome surveillance. Two studies compared different colonoscopy imaging modalities against chromoendoscopy. In a study of 138 individuals with Lynch syndrome undergoing back-to-back colonoscopies (first with NBI followed by indigo carmine chromoendoscopy), the adenoma detection rate (ADR) for NBI alone was 20.3% while the ADR for both was 30.4%. A 10.1% difference in detection failed to reach the prespecified noninferiority assumption margin of 5% . In another study of 256 individuals with Lynch syndrome randomized to indigo carmine chromoendoscopy versus high-definition white-light colonoscopy, no significant difference in ADR was detected by pancolonic chromoendoscpy (34.4%; 95% CI 26.
Source: GeneReviews — "Lynch Syndrome"
View trials for Lynch syndrome 5
Table 8. Recommended Surveillance for Individuals with Lynch Syndrome
System/Concern | Evaluation | Frequency |
|---|---|---|
Colorectal cancer | Colonoscopy w/removal of precancerous polyps1 | Every 1-2 yrs beginning between ages 20 25 yrs or 2-5 yrs before earliest CRC diagnosis in the family, whichever is earlier Endometrial |
cancer | Educate females re symptoms of endometrial cancers (e.g., abnormal uterine bleeding, postmenopausal bleeding). | Annually Consider transvaginal ultrasound exam endometrial biopsy2 |
Ovarian cancer | Educate females re symptoms assoc w/ovarian cancer (e.g., pelvic or abdominal pain, bloating, abdominal girth, difficulty eating, early satiety, urinary frequency or urgency). | Annually Gastric duodenal cancers |
Distal small bowel | Consider capsule endoscopy small bowel enterography. | In symptomatic persons Urinary tract cancers (renal pelvis, |
ureter, /or bladder) | Consider urine analysis w/urine cytology to identify microscopic hematuria in those w/family history of urothelial cancer.4 | Annually beginning between ages 30 35 yrs |
Pancreatic cancer | Consider pancreatic cancer screening in those w/family history of pancreatic cancer w/alternating EUS /or MRI/MRCP | Annually Other cancers; Follow general population screening guidelines seek prompt medical attention for changes in health or persistent symptoms. |
Source: GeneReviews — "Lynch Syndrome"
No clinical trials have been registered for Lynch syndrome 5.
120 publications have been identified in PubMed for Lynch syndrome 5. Kisho has analyzed 77 by research type. Research spans Review / Meta-Analysis (30%), Epidemiology / Natural History (29%), and Diagnostic / Biomarker (13%).
Research Type | Count | % of Total |
|---|---|---|
Research summaries | 23 | 30% |
Disease patterns and progression | 22 | 29% |
Testing and diagnosis research | 10 | 13% |
Laboratory research | 9 | 12% |
Clinical study results | 8 | 10% |
New treatment approaches | 3 | 4% |
Patient case studies | 2 | 3% |
Sherman S (2026). [PMID: 33232092](https://pubmed.ncbi.nlm.nih.gov/33232092/). *Unknown Journal*. [Review / Meta-Analysis]
Leung SW (2026). [PMID: 41358683](https://pubmed.ncbi.nlm.nih.gov/41358683/). *Dis Colon Rectum*. [Clinical Trial Publication]
D'Onofrio G (2026). [PMID: 41670966](https://pubmed.ncbi.nlm.nih.gov/41670966/). *JAMA*. [Clinical Trial Publication]
Yan G (2026). [PMID: 41247883](https://pubmed.ncbi.nlm.nih.gov/41247883/). *Int J Surg*. [Basic Science / Preclinical]
Bhattacharya P (2026). [PMID: 28613748](https://pubmed.ncbi.nlm.nih.gov/28613748/). *Unknown Journal*. [Diagnostic / Biomarker]
Houlston RS (2026). [PMID: 41825943](https://pubmed.ncbi.nlm.nih.gov/41825943/). *J Med Genet*. [Review / Meta-Analysis]
Campoy S (2026). [PMID: 41389835](https://pubmed.ncbi.nlm.nih.gov/41389835/). *J Natl Cancer Inst*. [Review / Meta-Analysis]
Kluk A (2026). [PMID: 41683729](https://pubmed.ncbi.nlm.nih.gov/41683729/). *Int J Mol Sci*. [Review / Meta-Analysis]
Park W (2026). [PMID: 42122252](https://pubmed.ncbi.nlm.nih.gov/42122252/). *Cancers (Basel)*. [Review / Meta-Analysis]
Maudot C (2025). [PMID: 40049800](https://pubmed.ncbi.nlm.nih.gov/40049800/). *Bull Cancer*. [Review / Meta-Analysis]
High (MMR proficient tumors)
Adult |
APC | Familial adenomatous polyposis (FAP) (See APC-Assoc Polyposis Conditions.) | AD | Colonic, gastric duodenal adenomas (100 cumulative polyps) | ~100% if untreated | 39 (range: 34-43); Polyp diagnosis: 16 (range: 7-36) |
risk of medulloblastoma, thyroid papillary carcinoma, hepatoblastoma, pancreatic, gastric duodenal cancers Attenuated familial adenomatous polyposis (AFAP) (See APC-Assoc Polyposis Conditions.) | AD | Colonic, gastric duodenal adenomas (10-100 cumulative polyps) | 70% by age 80 yrs | 50 | Upper GI findings thyroid duodenal cancer risks are similar to FAP.; Other extraintestinal manifestations are unusual.; Desmoid tumors assoc w/3' APC variants |
POLE | Polymerase proofreading-assoc polyposis (PPAP) (See OMIM 615083.) | AD | Colonic adenomas (0-100 cumulative polyps) | 30%-40% by age 70 yrs2; CRC may develop in absence of polyposis. | — |
Note: Most CRCs are MSS; some are MSI high. | 502 | risk of cancers of endometrium, ovary, brain, breast, other tumor types; Adenomas in upper GI tract | — | — | — |
POLD1 | Polymerase proofreading-assoc polyposis (PPAP) (See OMIM 612591.) | AD | Colonic adenomas (0-100 cumulative polyps) | 50%-60% by age 70 yrs2; CRC may develop in absence of polyposis. | — |
Note: Most CRCs are MSS; some are MSI high. | 35-402 | risk of cancers of endometrium, ovary, brain, breast, other tumor types; Adenomas in upper GI tract MUTYH | — | — | — |
MUTYH polyposis | AR | Colonic adenomas (10-100 cumulative polyps); Hyperplastic /or serrated polyps may occur.; Duodenal adenomas | 43%-63% by age 60 yrs; 80%-90% lifetime risk if untreated; CRC may develop in absence of polyposis | — | — |
Note: Most CRCs are MSS; a minority are MSI high. | 48 | Duodenal adenomas are common w/ risk of duodenal cancer.; risk of ovarian bladder malignancies; Additional features: thyroid nodules, benign adrenal lesions, jawbone cysts, CHRPE NTHL1 | — | — | — |
NTHL1 tumor syndrome | AR | Colonic adenomas (1-100 cumulative polyps); Hyperplastic /or serrated polyps may occur. | — | — | — |
Duodenal adenomas | High lifetime risk | 613 | High risk of multiple primary tumors; risk of breast endometrial cancers other tumors types: cervical, urothelial carcinoma of the bladder, meningiomas, unspecified brain tumors, basal cell carcinomas, head neck squamous cell carcinomas, hem... | — | — |
Source: GeneReviews — "Lynch Syndrome"