Kisho is an information platform, not a medical provider. Nothing on this site constitutes medical advice, diagnosis, or treatment recommendations. All content is aggregated from publicly available sources (including ClinicalTrials.gov, PubMed, FDA.gov, and Orphanet) and is provided for informational purposes only. Clinical trial eligibility, treatment decisions, and any health-related actions should always be discussed with a qualified healthcare professional. Kisho does not endorse any specific therapy, organization, or clinical trial. Terms of use · Privacy policy
Features include always present findings: Bilateral tonic-clonic seizure, Elevated circulating pipecolic acid concentration, and Clonic seizure; and very common findings: Delayed speech and language development, EEG with burst suppression, and Neonatal respiratory distress. 16 total HPO annotations.
Organ System | Phenotype Count | Example Features |
|---|---|---|
Brain and nerves | 8 | Bilateral tonic-clonic seizure, Delayed speech and language development, Status epilepticus |
Lab test results | 2 | Elevated circulating pipecolic acid concentration, Elevated circulating alpha-aminoadipic semialdehyde concentration |
Pregnancy and birth | 2 | Fetal distress, Neonatal respiratory distress |
Eyes | 1 | Strabismus |
Muscles | 1 | Low muscle tone (hypotonia) |
Lungs and breathing | 1 | Neonatal respiratory distress |
Age of onset: newborn period.
The one clinical feature characteristic of all individuals with pyridoxine-dependent epilepsy – ALDH7A1 (PDE-ALDH7A1) is seizures that are not well controlled with anti-seizure medication (ASM) but respond to large daily supplements of pyridoxine (vitamin B6). This is true across the phenotypic spectrum that ranges from classic to atypical PDE-ALDH7A1. Intellectual disability is common.
Seizures. Newborns with the classic neonatal presentation begin to experience seizures soon after birth. In retrospect, many mothers recount unusual intrauterine movements that may have started in the late second trimester and that likely represent fetal seizures . Multiple types of clinical seizures have been reported in untreated infants and children.
Source: GeneReviews — "Pyridoxine-Dependent Epilepsy – ALDH7A1"
ALDH7A1 encodes aldehyde dehydrogenase 7 family member A1 (539 aa). Aldehyde dehydrogenase enzyme that mediates important protective effects. Protects cells from oxidative stress by metabolizing a number of lipid peroxidation-derived aldehydes. Highest expression in Ovary (36.7 TPM) and Brain Amygdala (32.2 TPM).
Pyridoxine-dependent epilepsy caused by ALDH7A1 mutant is associated with mutations in the ALDH7A1 gene on chromosome 5.
The ALDH7A1 protein participates in ALDH7A1 tetramer, ALDH7A1 oxidises BETALD to BET, and alpha-aminoadipoate semialdehyde + NAD+ = alpha-aminoadipate + NADH + H+ pathways.
ALDH7A1 is classified as a druggable target (Druggable Genome and Enzyme categories) with score 4.4.
No genotype-phenotype correlations have been identified. The common c.1279GC; p.(Glu427Gln) pathogenic variant in exon 14 accounts for approximately 33% of pathogenic variants . Homozygous p.(Glu427Gln) variants have been observed in both neonatal- and late-onset PDE-ALDH7A1 . Pathogenic missense variants that result in residual enzyme activity may be associated with a more favorable developmental phenotype .
Source: GeneReviews — "Pyridoxine-Dependent Epilepsy – ALDH7A1"
Pyridoxine-dependent epilepsy – ALDH7A1 (PDE-ALDH7A1) should be suspected in individuals with the following clinical findings, response to intravenous (IV) or oral (PO) administration of pyridoxine, laboratory findings, and family history.
Suggestive clinical features
Source: GeneReviews — "Pyridoxine-Dependent Epilepsy – ALDH7A1"
Pyridoxine-dependent epilepsy – ALDH7A1 (PDE-ALDH7A1) must be distinguished from PNPO deficiency and PLPBP deficiency (also referred to as PLPHP deficiency), as well as other disorders associated with pyridoxine (PN)- and pyridoxal 5'-phosphate (PLP)-responsive seizures . Table 2. Selected Disorders of Interest in the Differential Diagnosis of Pyridoxine-Dependent Epilepsy – ALDH7A1
Gene | Disorder | Laboratory Features | Response to PN/PLP | Clinical Features |
|---|---|---|---|---|
PLPBP | PLPBP (PLPHP) deficiency2 | Secondary biochemical abnormalities suggesting abnormal vitamin B6 metabolism may be present, as may lactic acidosis. | Szs in affected children respond to supraphysiologic doses of PN (or PLP). | Majority have sz onset w/in 1st wk of life; some children present as late as 6 mos.3 Acquired microcephaly, structural brain abnormalities, DD/ID are variable. |
PNPO | PNPO deficiency2 |
Genetic testing for ALDH7A1 is available. Testing is considered confirmatory for diagnosis.
Biomarker and diagnostic research for pyridoxine-dependent epilepsy caused by ALDH7A1 mutant has been reported in the published literature.
No approved treatments are currently available for pyridoxine-dependent epilepsy caused by ALDH7A1 mutant. The disease remains an area of unmet medical need.
Clinical practice guidelines for pyridoxine-dependent epilepsy – ALDH7A1 (PDE-ALDH7A1) have been published .
To establish the extent of disease and needs in an individual diagnosed with PDE-ALDH7A1, the following evaluations (if not performed as part of the evaluation that led to the diagnosis) are recommended:
Neurologic examination to evaluate cranial nerve function, muscle strength, tone (for hypotonia or rigidity), and symmetry, and to describe seizure semiology
EEG including sleep and wake cycles
As congenital brain developmental abnormalities may occur in PDE-ALDH7A1, brain MRI when clinically indicated (e.g., macrocephaly, incomplete control of seizures to pyridoxine)
Developmental assessment including motor, adaptive, cognitive, and speech-language evaluation
Evaluation for early intervention programs/ special education
Consultation with a medical geneticist, certified genetic counselor, or certified advanced genetic nurse to inform affected individuals and their families about the nature, mode of inheritance, and implications of PDE-ALDH7A1 in order to facilitate medical and personal decision making
Treatment of Manifestations
Targeted Therapies
Source: GeneReviews — "Pyridoxine-Dependent Epilepsy – ALDH7A1"
Avoid overuse of pyridoxine (see Targeted Therapies, , Side effects).
Source: GeneReviews — "Pyridoxine-Dependent Epilepsy – ALDH7A1"
Search ClinicalTrials.gov in the US and EU Clinical Trials Register in Europe for access to information on clinical studies for a wide range of diseases and conditions.
Source: GeneReviews — "Pyridoxine-Dependent Epilepsy – ALDH7A1"
1 trial found
To monitor existing manifestations, the individual's response to supportive care, and the emergence of new manifestations, the following evaluations are recommended:
Regular assessment by treating neurologist for:
Control of epilepsy via targeted therapy with pyridoxine, and need for concomitant use of ASM
Development of clinical signs of a sensory neuropathy including regular assessments of joint-position sense, ankle jerks, gait, and station
Assessment for developmental progress and educational needs at each visit
If lysine reduction therapies are used, regular follow up by a biochemical geneticist and/or medical dietician
Source: GeneReviews — "Pyridoxine-Dependent Epilepsy – ALDH7A1"
Phenotype severity distribution: 3 always present features, 3 very common features, 4 common features.
1 clinical trial registered. Interventions under study include other interventions. Research is primarily sponsored by academic and government institutions.
54 publications have been identified in PubMed for pyridoxine-dependent epilepsy caused by ALDH7A1 mutant. Research spans Case Report / Case Series (30%), Review / Meta-Analysis (24%), and Basic Science / Preclinical (15%).
Research Type | Count | % of Total |
|---|---|---|
Patient case studies | 16 | 30% |
Research summaries | 13 | 24% |
Laboratory research | 8 | 15% |
Testing and diagnosis research | 7 | 13% |
Disease patterns and progression | 4 | 7% |
New treatment approaches | 3 | 6% |
Other research | 2 | 4% |
Clinical study results | 1 | 2% |
Martens J (2026). [PMID: 41330729](https://pubmed.ncbi.nlm.nih.gov/41330729/). *J Inherit Metab Dis*. [Review / Meta-Analysis]
Alsini H (2026). [PMID: 41671913](https://pubmed.ncbi.nlm.nih.gov/41671913/). *Mol Genet Metab*. [Review / Meta-Analysis]
Salih MA (2026). [PMID: 41836663](https://pubmed.ncbi.nlm.nih.gov/41836663/). *Front Psychiatry*. [Other]
Ambrose A (2026). [PMID: 41789364](https://pubmed.ncbi.nlm.nih.gov/41789364/). *Ther Adv Rare Dis*. [Basic Science / Preclinical]
Osman AA (2026). [PMID: 42248600](https://pubmed.ncbi.nlm.nih.gov/42248600/). *BMJ Case Rep*. [Case Report / Case Series]
Brands MM (2026). [PMID: 41429136](https://pubmed.ncbi.nlm.nih.gov/41429136/). *Neuropediatrics*. [Case Report / Case Series]
Abedrabbo M (2026). [PMID: 42072608](https://pubmed.ncbi.nlm.nih.gov/42072608/). *Biomolecules*. [Review / Meta-Analysis]
Guo Y (2026). [PMID: 41666987](https://pubmed.ncbi.nlm.nih.gov/41666987/). *Neurobiol Dis*. [Review / Meta-Analysis]
Pujee BK (2026). [PMID: 42078625](https://pubmed.ncbi.nlm.nih.gov/42078625/). *Ann Med Surg (Lond)*. [Case Report / Case Series]
Salih MA (2025). [PMID: 41341747](https://pubmed.ncbi.nlm.nih.gov/41341747/). *Mol Ther Nucleic Acids*. [Basic Science / Preclinical]
Data assembled from 7 of 12 sources · Last updated Sep 20, 2026, 1:45 AM UTC
Online Mendelian Inheritance in Man
Low CSF plasma levels of PLP when measured prior to administration of PN or PLP. Biochemical changes in CSF, plasma, urine prior to treatment w/PN or PLP indicative of activity of PLP-dependent enzymes (e.g., aromatic acid decarboxylase or glycine cleavage enzyme).
Szs in affected children respond to supraphysiologic doses of PLP (60% of affected persons) or PN (40% of affected persons). |
~90% have sz onset in neonatal period (often age 2 wks); some children present as late as age 3 yrs. ≥60% have DD/ID. Pyridoxine (vitamin B6)-responsive seizures4 |
ALDH4A1 | Hyperprolinemia type II2 (OMIM 239510) | Markedly plasma proline levels as well as P5C in urine | Szs may respond to ASM PN. | Szs usually manifest beyond neonatal period, may occur w/febrile infections, may respond to common ASM. Persons may have ID or normal intelligence. |
ALPL | Infantile hypophosphatasia5 | Suspected in presence of serum ALP enzyme activity (based on appropriate pediatric normative reference values) | Vitamin B6-responsive seizures may occur. | Clinical signs resembling rickets may be recognized between birth age 6 mos. Prior to availability of ERT, ~50% died of respiratory failure caused by undermineralization of ribs. Intractable szs may precede biochemical or radiographic manifestations of rickets. |
CACNA1A | Developmental epileptic encephalopathy 426 (OMIM 617106) | No assoc biochemical abnormalities | A female w/CACNA1A-related absence epilepsy ataxia responded dramatically to PN.7 | — |
KCNQ2 | KCNQ2-related disorders6 | No assoc biochemical abnormalities | Some w/neonatal epilepsy are vitamin B6 responsive.8 | May present w/benign familial neonatal epilepsy or severe neonatal epileptic encephalopathy. Szs are tonic often asymmetric. |
MOCS2 | MOSC2-related molybdenum cofactor deficiency2 | When present, -AASA is secondary to ALDH7A1 inhibition by accumulated S-sulfocysteine. | — | — |
Source: GeneReviews — "Pyridoxine-Dependent Epilepsy – ALDH7A1"