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Alagille (AGS) syndrome is variably characterized by chronic cholestasis due to paucity of intrahepatic bile ducts, peripheral pulmonary artery stenosis, vertebrae segmentation anomalies, characteristic facies, posterior embryotoxon/anterior segment abnormalities, pigmentary retinopathy, and dysplastic kidneys.
Features include very common findings: Clouding of the cornea (corneal dystrophy), Cholestasis, Failure to thrive, and Ventricular septal defect and others; and common findings: Coarse facial features, Pointed chin, Round face, and Protruding ear and others. 43 total HPO annotations.
Organ System | Phenotype Count | Example Features |
|---|---|---|
Bones and joints | 4 | Delayed skeletal maturation, Abnormal form of the vertebral bodies, Vertebral segmentation defect |
Head and neck | 3 | Coarse facial features, Round face, Flat face |
Eyes | 3 | Strabismus, Keratoconus, Clouding of the cornea (corneal dystrophy) |
Heart and blood vessels | 3 | Hypertension, Ventricular septal defect, Atrial septal defect |
Kidneys and urinary system | 2 | Nephrotic syndrome, Renal hypoplasia/aplasia |
Brain and nerves | 2 | Mild intellectual disability, Specific learning disability |
Digestive system | 2 | Cholestasis, Enlarged liver (hepatomegaly) |
Growth and development | 2 | Failure to thrive, Intrauterine growth retardation |
Arms and legs | 2 | Clinodactyly of the 5th finger, Short distal phalanx of finger |
Hormones | 1 | Delayed puberty |
Lungs and breathing | 1 | Peripheral pulmonary artery stenosis |
Skin | 1 | Visible small blood vessels on skin (telangiectasia of the skin) |
Alagille syndrome (ALGS) is a multisystem disorder with a wide spectrum of clinical variability ranging from life-threatening liver or cardiac disease to only subclinical manifestations (e.g., butterfly vertebrae, posterior embryotoxon, characteristic facial features) . Some individuals present with an isolated feature (e.g., cardiac disease, aneurysmal disease) . Clinical variability is seen even among individuals from the same family . To date, more than 700 individuals with ALGS have been found to have a pathogenic variant in JAG1 or NOTCH2 . lists the phenotypic features associated with this condition. Table 2. Alagille Syndrome: Frequency of Select Features
Feature | % of Persons w/Feature | Comment |
|---|---|---|
Hepatic abnormality | 95% | Bile duct paucity; conjugated hyperbilirubinemia; chronic cholestasis characterized by pruritus, xanthomas, fat-soluble vitamin deficiencies; end-stage liver disease |
Clinical diagnostic criteria for Alagille syndrome (ALGS) have been published .
ALGS should be suspected in individuals with any combination of the following histologic findings, major clinical features, and/or family history. The histologic finding of bile duct paucity (an increased portal tract-to-bile duct ratio) on liver biopsy. Although considered to be the most important and constant feature of ALGS, bile duct paucity is only identified in 65% of biopsies done in the first three months of life. In the newborn, a normal ratio of portal tracts to bile ducts, bile duct proliferation, or histology suggestive of neonatal hepatitis may be observed. Eventually, bile duct paucity is present in about 95% of individuals .
Source: GeneReviews — "Alagille Syndrome"
Bile duct paucity is not seen exclusively in Alagille syndrome (ALGS). Other causes of bile duct paucity include single-gene disorders , chromosome abnormalities (Down syndrome), infectious diseases (congenital cytomegalovirus, congenital rubella, congenital syphilis, hepatitis B), and immunologic disorders (graft-vs-host disease, chronic hepatic allograft rejection, primary sclerosing cholangitis). These can be distinguished from ALGS by history, by the presence of other findings, or by genetic testing. Intrahepatic cholestasis. Selected examples of inherited disorders associated with intrahepatic cholestasis are listed in . These conditions are largely confined to the liver, but some are associated with extrahepatic manifestations. Neonatal cholestasis.
Source: GeneReviews — "Alagille Syndrome"
Biomarker and diagnostic research for Alagille syndrome has been reported in the published literature.
2 FDA-approved treatments are available for Alagille syndrome, including ODEVIXIBAT (BYLVAY, approved 2021) and MARALIXIBAT CHLORIDE (LIVMARLI, approved 2021). An additional 1 compound holds orphan drug designation.
Brand Name | Generic Name | Mechanism | Approved | Market Status |
|---|---|---|---|---|
LIVMARLI | MARALIXIBAT CHLORIDE | — | 2021 | Available |
BYLVAY | ODEVIXIBAT | — | 2021 | Available |
The following drugs have received orphan drug designation from the FDA for Alagille syndrome. Orphan designation reflects regulatory interest and does not indicate approval for treatment.
Brand Name | Generic Name | Sponsor | Designated | Exclusivity End | Designation Status |
|---|---|---|---|---|---|
27mer antisense oligonucleotide with methoxyethyl, 2'-O-methyl, and phosphorothioate modifications | 27mer antisense oligonucleotide with methoxyethyl, 2'-O-methyl, and phosphorothioate modifications | Arnatar Therapeutics, Inc. | 2024 | — | Designated |
No clinical practice guidelines for Alagille syndrome (ALGS) have been published.
To establish the extent of disease and needs in an individual diagnosed with ALGS, the evaluations summarized (if not performed as part of the evaluation that led to the diagnosis) are recommended.
Table 5.
Alagille Syndrome: Recommended Evaluations Following Initial Diagnosis
System/Concern | Evaluation | Comment
| Eval by gastroenterologist to incl:
Total conjugated/direct bilirubin
Liver enzymes (incl GGT)
Clotting studies
| If determined necessary by gastroenterologist, additional studies incl:
Serum bile acids
Lipid panel
Fat-soluble vitamin levels
Hepatic ultrasound
Tc-99m DISIDA scintigraphy
Contact sports should be avoided by all individuals, especially those with chronic liver disease, splenomegaly, and vascular involvement. Individuals with liver disease should avoid alcohol consumption.
Source: GeneReviews — "Alagille Syndrome"
Search ClinicalTrials.gov in the US and EU Clinical Trials Register in Europe for access to information on clinical studies for a wide range of diseases and conditions. Note: There may not be clinical trials for this disorder.
Source: GeneReviews — "Alagille Syndrome"
9 trials found
To date, surveillance guidelines for ALGS have not been published. In the absence of published guidelines, recommendations to monitor existing manifestations, the individual's response to supportive care, and the emergence of new manifestations are based on the authors' personal experience managing individuals with this disorder . Table 7. Alagille Syndrome: Recommended Surveillance
System/Concern | Evaluation | Frequency |
|---|---|---|
Liver disease | Assess liver function | Per gastroenterologist/hepatologist |
Hepatocellular carcinoma | Serum alpha-fetoprotein ultrasound of liver | While no formal guidelines are available, one recent study has recommended screening every 6 mos at all ages.1 |
Growth/Nutrition | Monitor growth using standard growth charts. | At each visit Nutrition assessment |
Cardiac manifestations | Assess for signs/symptoms of vascular manifestations. | Per cardiologist; Note: At this time, the efficacy of presymptomatic screening for vascular anomalies in persons w/ALGS has not been formally evaluated. |
Vision deficits | Vision assessment | Per ophthalmologist |
Skeletal manifestations | Asses for recurrent fractures. | At each visit Renal disease |
Source: GeneReviews — "Alagille Syndrome"
Phenotype severity distribution: 6 very common features, 12 common features.
Estimated prevalence: Unknown (Unknown prevalence).
9 clinical trials registered, 5 recruiting. Interventions under study include drug therapy and other interventions. Pipeline includes 2 PHASE4, 1 PHASE3. Research is sponsored by a mix of industry and academic institutions.
NCT ID | Title | Phase | Sponsor | Status |
|---|---|---|---|---|
[NCT06193928](https://clinicaltrials.gov/study/NCT06193928) | Long-Term SafEty and Clinical Outcomes of LivmArli in Patients in the United States (LEAP-US) | — | Mirum Pharmaceuticals, Inc. | UNKNOWN |
[NCT05035030](https://clinicaltrials.gov/study/NCT05035030) | Long-term Safety and Efficacy of Odevixibat in Patients With Alagille Syndrome | PHASE3 | Albireo, an Ipsen Company | UNKNOWN |
[NCT01793168](https://clinicaltrials.gov/study/NCT01793168) | Rare Disease Patient Registry & Natural History Study - Coordination of Rare Diseases at Sanford | — | Sanford Health | RECRUITING |
[NCT05488067](https://clinicaltrials.gov/study/NCT05488067) | Atorvastatin Therapy on Xanthoma in Alagille Syndrome | PHASE4 | Children's Hospital of Fudan University | UNKNOWN |
[NCT07293897](https://clinicaltrials.gov/study/NCT07293897) | A Database Study of Maralixibat (TAK-625) in Participants With Alagille Syndrome (ALGS) and Progressive Familial Intrahepatic Cholestasis (PFIC) | — | Takeda | RECRUITING |
141 publications have been identified in PubMed for Alagille syndrome. Research spans Case Report / Case Series (32%), Review / Meta-Analysis (24%), and Epidemiology / Natural History (13%).
Research Type | Count | % of Total |
|---|---|---|
Patient case studies | 45 | 32% |
Research summaries | 34 | 24% |
Disease patterns and progression | 18 | 13% |
Laboratory research | 14 | 10% |
Other research | 8 | 6% |
Testing and diagnosis research | 8 |
Rodrigo M (2026). [PMID: 41817014](https://pubmed.ncbi.nlm.nih.gov/41817014/). *Liver Int*. [Epidemiology / Natural History]
Peng Z (2026). [PMID: 41439138](https://pubmed.ncbi.nlm.nih.gov/41439138/). *Genes Dis*. [Case Report / Case Series]
Wiesener MS (2026). [PMID: 41577389](https://pubmed.ncbi.nlm.nih.gov/41577389/). *Kidney Int*. [Basic Science / Preclinical]
Sodhani S (2026). [PMID: 29939604](https://pubmed.ncbi.nlm.nih.gov/29939604/). *Unknown Journal*. [Clinical Trial Publication]
Buhl N (2026). [PMID: 41998240](https://pubmed.ncbi.nlm.nih.gov/41998240/). *Hum Genet*. [Diagnostic / Biomarker]
Shi Q (2026). [PMID: 41878160](https://pubmed.ncbi.nlm.nih.gov/41878160/). *Front Cell Dev Biol*. [Review / Meta-Analysis]
Sharma P (2026). [PMID: 41865103](https://pubmed.ncbi.nlm.nih.gov/41865103/). *Hepatol Int*. [Basic Science / Preclinical]
McCreary DJ (2026). [PMID: 42090075](https://pubmed.ncbi.nlm.nih.gov/42090075/). *J Ultrasound*. [Case Report / Case Series]
Bora G (2026). [PMID: 41695072](https://pubmed.ncbi.nlm.nih.gov/41695072/). *JPGN Rep*. [Case Report / Case Series]
Tulshan N (2026). [PMID: 42022178](https://pubmed.ncbi.nlm.nih.gov/42022178/). *J Clin Exp Hepatol*. [Case Report / Case Series]
Data assembled from 7 of 12 sources · Last updated Sep 19, 2026, 7:39 AM UTC
Patient Advocacy Groups (PAGs) provide support, resources, and community for patients and caregivers.
European rare disease database
Genetic and Rare Diseases Info Center
Cardiac manifestations
90%-97% |
Most commonly including peripheral pulmonary stenosis tetralogy of Fallot |
Posterior embryotoxon | 78%-89% | — |
Vertebral anomalies | 33%-93% | — |
Characteristic facies | 20%-90% | — |
Renal manifestations | 39% | Renal malformations kidney disease |
Vascular | 15%-30% | Intracranial bleeds, systemic vascular anomalies, other, including moyamoya disease Onset. Individuals with ALGS who have severe liver or cardiac involvement are most often diagnosed in infancy. |
Source: GeneReviews — "Alagille Syndrome"
| Complete cardiology eval | Incl echocardiogram
Eyes | Ophthalmologic eval | Look for anterior chamber anomalies.
| AP lateral chest radiographs to evaluate for presence of butterfly vertebrae |
| Evaluate w/renal function studies renal ultrasound |
| Measurement of growth parameters plotting on age-appropriate growth charts |
| Screening developmental eval | Perform more detailed eval if significant delays are identified.
| By genetics professionals1 | To inform affected persons their families re nature, MOI, implications of ALGS to facilitate medical personal decision making
Family support
Source: GeneReviews — "Alagille Syndrome"
Clinical study results | 7 | 5% |
New treatment approaches | 7 | 5% |
AI-curated news mentioning Alagille syndrome
Updated Apr 27, 2026
A cross-sectional study highlights the disease burden and health-related quality of life in Chinese children with genetic cholestatic liver diseases, specifically focusing on progressive familial intrahepatic cholestasis and Alagille syndrome. This research provides valuable insights into the impact of these conditions on pediatric patients.
A recent study published in PubMed highlights native liver survival rates and genetic associations in Korean patients with Alagille syndrome. This research contributes to understanding the genetic factors influencing the disease's progression.
A new article outlines essential steps for parents after their child is diagnosed with Alagille Syndrome, emphasizing the importance of education, support networks, and medical management. This guidance aims to empower families navigating this rare disease.
The Mighty provides guidance for families preparing for medical appointments related to Alagille Syndrome. This resource aims to empower patients and caregivers with strategies to effectively communicate their needs and concerns.