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Carbamoyl-phosphate synthetase 1 deficiency (CPS1D) is a rare and severe disorder of urea cycle metabolism most commonly characterized by either a neonatal-onset of severe hyperammonemia that occurs few days after birth and manifests with lethargy, vomiting, hypothermia, seizures, coma and death or a presentation outside the newborn period at any age with (sometimes) milder symptoms of hyperammonemia.
Features include always present findings: Lethargy; and very common findings: Hypoargininemia, Seizure, Hyperammonemia, and Episodic ammonia intoxication and others. 20 total HPO annotations.
Organ System | Phenotype Count | Example Features |
|---|---|---|
Brain and nerves | 7 | Stroke, Seizure, Global developmental delay |
Lungs and breathing | 2 | Respiratory alkalosis, Difficulty breathing (respiratory insufficiency) |
Heart and blood vessels | 1 | Stroke |
Digestive system | 1 | Vomiting |
Growth and development | 1 | Failure to thrive |
Muscles | 1 | Low muscle tone (hypotonia) |
CPS1 encodes carbamoyl-phosphate synthase 1 (1,500 aa). Involved in the urea cycle of ureotelic animals where the enzyme plays an important role in removing excess ammonia from the cell Highest expression in Liver (347.1 TPM) and Small Intestine Terminal Ileum (29.9 TPM).
Carbamoyl phosphate synthetase I deficiency disease is caused by mutations in the CPS1 gene on chromosome 2.
CPS1 is classified as a druggable target (Clinically Actionable, Druggable Genome, and Enzyme categories) with score 7.5.
Genetic testing for CPS1 is available. Testing is considered confirmatory for diagnosis.
Biomarker and diagnostic research for carbamoyl phosphate synthetase I deficiency disease has been reported in the published literature.
Phenotype severity distribution: 1 always present feature, 7 very common features.
Estimated prevalence: Unknown (Unknown prevalence).
1 clinical trial registered. Interventions under study include other interventions. Research is primarily sponsored by academic and government institutions.
11 publications have been identified in PubMed for carbamoyl phosphate synthetase I deficiency disease. Research spans Review / Meta-Analysis (27%), Case Report / Case Series (18%), and Basic Science / Preclinical (18%).
Research Type | Count | % of Total |
|---|---|---|
Research summaries | 3 | 27% |
Patient case studies | 2 | 18% |
Laboratory research | 2 | 18% |
Disease patterns and progression | 2 | 18% |
Testing and diagnosis research | 1 | 9% |
New treatment approaches | 1 | 9% |
Chen L (2026). [PMID: 41629147](https://pubmed.ncbi.nlm.nih.gov/41629147/). *Gut*. [Review / Meta-Analysis]
Rieske A (2026). [PMID: 41827217](https://pubmed.ncbi.nlm.nih.gov/41827217/). *J Clin Med*. [Review / Meta-Analysis]
Bakshi S (2025). [PMID: 40421838](https://pubmed.ncbi.nlm.nih.gov/40421838/). *Dis Model Mech*. [Basic Science / Preclinical]
Yokota K (2025). [PMID: 40125546](https://pubmed.ncbi.nlm.nih.gov/40125546/). *Mol Genet Metab Rep*. [Case Report / Case Series]
Erdal R (2025). [PMID: 40710547](https://pubmed.ncbi.nlm.nih.gov/40710547/). *Metabolites*. [Review / Meta-Analysis]
Li F (2025). [PMID: 40212732](https://pubmed.ncbi.nlm.nih.gov/40212732/). *Mol Genet Metab Rep*. [Diagnostic / Biomarker]
Diep T (2025). [PMID: 40083646](https://pubmed.ncbi.nlm.nih.gov/40083646/). *Molecular therapy. Nucleic acids*. [Gene Therapy / Novel Therapeutics]
Gougeard N (2024). [PMID: 38740568](https://pubmed.ncbi.nlm.nih.gov/38740568/). *J Inherit Metab Dis*. [Basic Science / Preclinical]
Noori M (2024). [PMID: 39469307](https://pubmed.ncbi.nlm.nih.gov/39469307/). *Mol Genet Metab Rep*. [Epidemiology / Natural History]
Dong H (2024). [PMID: 39174957](https://pubmed.ncbi.nlm.nih.gov/39174957/). *BMC Pediatr*. [Epidemiology / Natural History]
Data assembled from 8 of 12 sources · Last updated Sep 20, 2026, 3:33 PM UTC
Online Mendelian Inheritance in Man
European rare disease database
Genetic and Rare Diseases Info Center
Common questions about carbamoyl phosphate synthetase I deficiency disease
AI-curated news mentioning carbamoyl phosphate synthetase I deficiency disease
Updated Mar 12, 2026
A personalized gene editing therapy successfully treated an infant with CPS1 deficiency, a rare metabolic disease causing ammonia buildup in the blood. This groundbreaking approach, developed in under a year, opens avenues for similar treatments for numerous metabolic disorders.