Kisho is an information platform, not a medical provider. Nothing on this site constitutes medical advice, diagnosis, or treatment recommendations. All content is aggregated from publicly available sources (including ClinicalTrials.gov, PubMed, FDA.gov, and Orphanet) and is provided for informational purposes only. Clinical trial eligibility, treatment decisions, and any health-related actions should always be discussed with a qualified healthcare professional. Kisho does not endorse any specific therapy, organization, or clinical trial. Terms of use · Privacy policy
1q41q42 microdeletion syndrome is a chromosomal anomaly characterized by a severe developmental delay and/or intellectual disability, typical facial dysmorphic features, brain anomalies, seizures, cleft palate, clubfeet, nail hypoplasia and congenital heart disease.
Features include very common findings: Short stature, Seizure, Intellectual disability, and Global developmental delay and others; and common findings: Sparse eyebrow, Thick vermilion border, Hypertelorism, and Microcephaly and others. 60 total HPO annotations.
Organ System | Phenotype Count | Example Features |
|---|---|---|
Head and neck | 9 | Tented upper lip vermilion, Coarse facial features, Cleft palate |
Phenotype severity distribution: 10 very common features, 14 common features.
Estimated prevalence: Unknown (Unknown prevalence).
Data assembled from 4 of 12 sources · Last updated Sep 20, 2026, 5:39 PM UTC
Online Mendelian Inheritance in Man
European rare disease database
Genetic and Rare Diseases Info Center
Common questions about chromosome 1q41-q42 deletion syndrome
Brain and nerves |
7 |
Seizure, Intellectual disability, Global developmental delay |
Growth and development | 2 | Short stature, Growth delay |
Skin | 2 | Preauricular skin tag, Small nail |
Pregnancy and birth | 2 | Congenital diaphragmatic hernia, Neonatal hypotonia |
Bones and joints | 2 | Vertebral segmentation defect, Sideways curvature of the spine (scoliosis) |
Arms and legs | 1 | 3-4 finger cutaneous syndactyly |
Lungs and breathing | 1 | Pulmonary hypoplasia |
Heart and blood vessels | 1 | Ventricular septal defect |
Eyes | 1 | Strabismus |
Hormones | 1 | Hypergonadotropic hypogonadism |
Muscles | 1 | Neonatal hypotonia |
Nervous system (morphological) | 1 | Morphological central nervous system abnormality |
Blood and immune system | 1 | Hyposegmentation of neutrophil nuclei |
Age of onset: at birth.