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Features include always present findings: Bilateral tonic-clonic seizure, EEG abnormality, Loss of previously acquired skills (developmental regression), and Atonic seizure and others. 17 total HPO annotations.
Data assembled from 6 of 12 sources · Last updated Sep 19, 2026, 1:05 PM UTC
Online Mendelian Inheritance in Man
Genetic and Rare Diseases Info Center
Organ System | Phenotype Count | Example Features |
|---|---|---|
Brain and nerves | 13 | Bilateral tonic-clonic seizure, Absent speech, Loss of previously acquired skills (developmental regression) |
Head and neck | 1 | Microcephaly |
Muscles | 1 | Generalized hypotonia |
To date, 83 individuals have been identified with a pathogenic variant in HNRNPU [, , , , , , , , , , , ]. The following description of the phenotypic features associated with this condition is based on these reports. Table 2. Select Features of HNRNPU-Related Neurodevelopmental Disorder
Feature | % of Personsw/Feature | Comment |
|---|---|---|
Developmental delay | 100% | — |
Dysmorphic craniofacial features | 97% | See Dysmorphic features following this table. |
Seizure disorder | 95% | ~90% have 1st seizure before age 24 mos (tonic-clonic in ~60%, absence in ~44%)1 |
Intellectual disability | 84% | Typically moderate to severe |
Speech delay | 80% | Usually limited or no speech |
Hypotonia | 79% | Slightly fewer than 50% have congenital hypotonia. |
Feeding difficulties | 57% | Some require supplemental nasogastric feeding or percutaneous gastrostomy. |
Behavioral issues | 50% | Autistic features are observed in ~33% of affected persons. |
Eye anomalies | 36% | The most common finding is strabismus. |
Cardiac abnormalities | 30% | Septal defects are the most common. |
Renal anomalies | 10% | — |
Hyperventilation apnea | Rare | 1. Developmental delay (DD) and intellectual disability (ID), typically affecting all developmental domains and falling into the moderate-to-severe range, have been found in all reported individuals to date. |
Source: GeneReviews — "HNRNPU-Related Neurodevelopmental Disorder"
HNRNPU encodes heterogeneous nuclear ribonucleoprotein U (825 aa). DNA- and RNA-binding protein involved in several cellular processes such as nuclear chromatin organization, telomere-length regulation, transcription, mRNA alternative splicing and stability, Xist-mediated transcriptional silencing and mitotic cell progression. Highest expression in Cells EBV-transformed lymphocytes (142.0 TPM) and Ovary (131.1 TPM).
Developmental and epileptic encephalopathy, 54 is associated with mutations in the HNRNPU gene on chromosome 1.
HNRNPU is classified as a druggable target (B30 2 Spry Domain, Cell Surface, Druggable Genome, and Transcription Factor categories) with score 0.0.
No consensus clinical diagnostic criteria for HNRNPU-related neurodevelopmental disorder (HNRNPU-NDD) have been published.
HNRNPU-NDD should be considered in individuals with the following clinical and brain MRI findings. Clinical findings (presenting in infancy or childhood). Moderate-to-severe developmental delay (DD) or intellectual disability (ID) AND any of the following:
Generalized hypotonia of infancy
Infant feeding difficulties
Speech and language delay and/ or absent speech
Autism spectrum disorder or autistic traits
Nonspecific dysmorphic facial features (See .)
Epilepsy, including generalized tonic-clonic seizures and absence seizures
Short stature
Strabismus
Brain MRI findings. The most common brain MRI findings are nonspecific but include:
Source: GeneReviews — "HNRNPU-Related Neurodevelopmental Disorder"
Because the phenotypic features associated with HNRNPU-related neurodevelopmental disorder are not sufficient to diagnose this condition, all disorders with epileptic encephalopathy and intellectual disability without other distinctive findings should be considered in the differential diagnosis. See OMIM Developmental and Epileptic Encephalopathy Phenotypic Series.
Source: GeneReviews — "HNRNPU-Related Neurodevelopmental Disorder"
Genetic testing for HNRNPU is available. Testing is considered confirmatory for diagnosis.
Biomarker and diagnostic research for developmental and epileptic encephalopathy, 54 has been reported in the published literature.
No approved treatments are currently available for developmental and epileptic encephalopathy, 54. The disease remains an area of unmet medical need.
No clinical practice guidelines for HNRNPU-related neurodevelopmental disorder (HNRNPU-NDD) have been published. Evaluations Following Initial Diagnosis To establish the extent of disease and needs in an individual diagnosed with HNRNPU-NDD, the evaluations summarized (if not performed as part of the evaluation that led to diagnosis) are recommended. Table 3. Recommended Evaluations Following Initial Diagnosis in Individuals with HNRNPU-Related Neurodevelopmental Disorder
System/Concern | Evaluation | Comment |
|---|---|---|
Constitutional | Measurement of growth parameters | To incl weight, length/height, head circumference |
Neurologic | Neurologic eval | To incl brain MRI if unresolved/refractory seizures are present; Consider EEG if seizures are a concern. |
Development | Developmental assessment | To incl motor, adaptive, cognitive, speech/language eval; Eval for early intervention / special education Psychiatric/ |
Behavioral | Neuropsychiatric eval | For persons age 12 mos: screening for behavior concerns incl sleep disturbances, ADD, aggressive or destructive behaviors, /or traits suggestive of ASD Gastrointestinal/ |
Feeding | Gastroenterology/ nutrition/ feeding team eval |
Source: GeneReviews — "HNRNPU-Related Neurodevelopmental Disorder"
Avoid activities and agents that may induce seizures, as the majority of affected individuals have a seizure disorder.
Source: GeneReviews — "HNRNPU-Related Neurodevelopmental Disorder"
Sustained single-dose gene therapy treatments for genetic forms of epilepsy, including HNRNPU-NDD, are currently being explored. This approach will be based on developing mRNA therapies and/or using a viral vector, such as AAV-9 (adeno-associated vector serotype 9), to deliver therapeutic protein to treat those forms of epilepsy caused by haploinsufficiency of proteins such as HNRNPU. Search ClinicalTrials.gov in the US and EU Clinical Trials Register in Europe for access to information on clinical studies for a wide range of diseases and conditions.
Source: GeneReviews — "HNRNPU-Related Neurodevelopmental Disorder"
View trials for developmental and epileptic encephalopathy, 54
Table 5.
Recommended Surveillance for Individuals with HNRNPU-Related Neurodevelopmental Disorder
System/Concern | Evaluation | Frequency
| • Measurement of growth parameters
Eval of nutritional status safety of oral intake
| At each visit
| Monitor for constipation.
| • Monitor those w/seizures as clinically indicated.
Assess for new manifestations such as seizures changes in tone.
| Monitor developmental progress educational needs.
Psychiatric/
| Behavioral assessment for anxiety, attention, aggressive or self-injurious behavior
| Monitor for evidence of hyperventilation apnea.
| Physical medicine, OT/PT assessment of mobility, self-help skills
Family/
| Assess family need for social work support (e.g., palliative/respite care, home nursing, other local resources) care coordination.
Eyes | Ophthalmologic eval | Annually or as clinically indicated
| Audiologic eval
OT = occupational therapy; PT = physical therapy
Source: GeneReviews — "HNRNPU-Related Neurodevelopmental Disorder"
Phenotype severity distribution: 10 always present features.
No clinical trials have been registered for developmental and epileptic encephalopathy, 54.
19 publications have been identified in PubMed for developmental and epileptic encephalopathy, 54. Research spans Epidemiology / Natural History (37%), Case Report / Case Series (26%), and Clinical Trial Publication (16%).
Research Type | Count | % of Total |
|---|---|---|
Disease patterns and progression | 7 | 37% |
Patient case studies | 5 | 26% |
Clinical study results | 3 | 16% |
Testing and diagnosis research | 2 | 11% |
Research summaries | 1 | 5% |
Laboratory research | 1 | 5% |
Jadhav T (2026). [PMID: 42081271](https://pubmed.ncbi.nlm.nih.gov/42081271/). *Epilepsia Open*. [Case Report / Case Series]
Vikin T (2026). [PMID: 41066145](https://pubmed.ncbi.nlm.nih.gov/41066145/). *Epilepsia*. [Epidemiology / Natural History]
Caputo D (2026). [PMID: 41133379](https://pubmed.ncbi.nlm.nih.gov/41133379/). *Epilepsia*. [Epidemiology / Natural History]
McPherson TO (2026). [PMID: 41904855](https://pubmed.ncbi.nlm.nih.gov/41904855/). *Pediatr Neurol*. [Clinical Trial Publication]
Benítez-Provedo C (2026). [PMID: 42184160](https://pubmed.ncbi.nlm.nih.gov/42184160/). *Epilepsia*. [Case Report / Case Series]
Ramantani G (2026). [PMID: 42227967](https://pubmed.ncbi.nlm.nih.gov/42227967/). *Epilepsia*. [Epidemiology / Natural History]
Wang Y (2025). [PMID: 41245873](https://pubmed.ncbi.nlm.nih.gov/41245873/). *Frontiers in neurology*. [Basic Science / Preclinical]
Akimova D (2025). [PMID: 40923359](https://pubmed.ncbi.nlm.nih.gov/40923359/). *Molecular genetics & genomic medicine*. [Case Report / Case Series]
Hodgson AKO (2025). [PMID: 39976380](https://pubmed.ncbi.nlm.nih.gov/39976380/). *American journal of medical genetics. Part A*. [Review / Meta-Analysis]
Thaher D (2025). [PMID: 40156306](https://pubmed.ncbi.nlm.nih.gov/40156306/). *Journal of child neurology*. [Epidemiology / Natural History]
To incl eval of feeding ability nutritional status; Consider eval for swallowing dysfunction gastric tube placement in those w/dysphagia or continued poor growth on oral feedings alone.1 |
Cardiovascular | Echocardiogram | To assess valvular problems anatomic heart defects Respiratory/ |
Sleep | Evaluate for signs symptoms of sleep apnea | Consider polysomnogram if concerns about sleep disturbance or apnea. |
Eyes | Ophthalmologic eval | To assess for strabismus |
Hearing | Audiologic eval | To assess for hearing loss |
Genitourinary | Physical exam for undescended testes in males | Consider referral to urologist, if present. Consider renal ultrasound to assess for renal anomalies. |
Musculoskeletal | Orthopedics/ physical medicine rehab/ PT OT eval | To incl assessment of:; Gross motor fine motor skills; Mobility, ADL, need for adaptive devices; Need for PT (to improve gross motor skills) /or OT (to improve fine motor skills) Genetic |
counseling | By genetics professionals2 | To inform affected persons their families re nature, MOI, implications of HNRNPU-NDD to facilitate medical personal decision making Family support resources |
Treatment of Manifestations in Individuals with HNRNPU-Related Neurodevelopmental Disorder Manifestation/Concern | Treatment | Considerations/Other Hypotonia/ |
Hypertonia | Orthopedics / physical medicine rehab/ PT OT incl exercises to address muscle tone issues | Consider need for positioning mobility devices, disability parking placard. Consider involving appropriate specialists to aid in mgmt of baclofen, tizanidine, Botox®, or orthopedic procedures. |
Epilepsy | Standardized treatment w/ASM by experienced neurologist | Many ASMs may be effective; sodium valproate is the most commonly used effective medication.1; Ketogenic diet newer ASMs may be required for refractory seizures.; Education of parents/caregivers2 DD/ID / Behavioral |
issues | See . | Poor weight gain/ Failure |
to thrive | Feeding therapy; nasogastric or gastrostomy tube placement may be required for persistent feeding issues. | Low threshold for clinical feeding eval /or radiographic swallowing study if clinical signs or symptoms of dysphagia Congenital |
heart defects | Standard treatment per cardiologist | — |
Sleep apnea | In conjunction w/sleep specialist, appropriate treatment options may incl supplemental oxygen, CPAP, or BiPAP. | It is important to consider additional factors that may contribute to sleep apnea, incl opioids ASM. Hyperventilation/ Abnormal breathing |
patterns | Standard treatment per pulmonologist | Combined treatment w/acetazolamide, alprazolam, aripiprazole successfully used in 1 person.3 |
Strabismus | Standard treatment(s) per ophthalmologist | Hearing loss |